RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 CTSL3PQ5NE16 218 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 C10orf120Q5SQS8 335 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 PVRIGQ6DKI7 326 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 TWF2Q6IBS0 349 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 OR4F3Q6IEY1 312 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 APTXQ7Z2E3 356 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 PAQR7Q86WK9 346 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CCDC50Q8IVM0 306 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ZNF100Q8IYN0 542 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ENTHD1Q8IYW4 607 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CMTM8Q8IZV2 173 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 UBE2J2Q8N2K1 259 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 BBS5Q8N3I7 341 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 DHRSXQ8N5I4 330 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 Q8N9L7 120 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 OR9K2Q8NGE7 335 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 AKR7LQ8NHP1 331 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ZNF461Q8TAF7 563 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 SDR42E1Q8WUS8 393 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 FGGYQ96C11 551 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 C12orf66Q96MD2 445 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 RPRD1AQ96P16 312 aaPredicted RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 NIPSNAP3BQ9BS92 247 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 NUP58Q9BVL2 599 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 NUDT9Q9BW91 350 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 GON7Q9BXV9 100 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 MAGT1Q9H0U3 335 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 OR51J1Q9H342 316 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 LRRN3Q9H3W5 708 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 GLIPR2Q9H4G4 154 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 SMYD3Q9H7B4 428 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 METTL7AQ9H8H3 244 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 NANOGQ9H9S0 305 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 AGPAT4Q9NRZ5 378 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 NUDT15Q9NV35 164 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ETNK2Q9NVF9 386 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 UTP6Q9NYH9 597 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 STMN3Q9NZ72 180 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 SPATA7Q9P0W8 599 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 WRAP73Q9P2S5 460 aaPredicted RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 RABL2AQ9UBK7 228 aaPredicted RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 LCMT1Q9UIC8 334 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 PIGLQ9Y2B2 252 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 POLDIP2Q9Y2S7 368 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 MAD1L1Q9Y6D9 718 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 FLG2Q5D862 2391 aaPredicted RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 ZBED9Q6R2W3 1325 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 FANCIQ9NVI1 1328 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 GOLGA8OA6NCC3 632 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 GOLGA8NF8WBI6 632 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 MED7O43513 233 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 EFNA2O43921 213 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 TIMM8AO60220 97 aaPredicted RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 CACNG3O60359 315 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 KLHL41O60662 606 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 ERLIN1O75477 346 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 GPX5O75715 221 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 UGT2B17O75795 530 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 SERPINA3P01011 423 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 AGTP01019 485 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 OR8U8P0C7N1 319 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 CCL4P13236 92 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 GCFC2P16383 781 aaKnown RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 NCF2P19878 526 aaPredicted RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 IMPDH1P20839 514 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 MMP11P24347 488 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 CD80P33681 288 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 HPCAL1P37235 193 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 BDKRB1P46663 353 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 CASP4P49662 377 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 SUCLG1P53597 346 aaKnown RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 LIM2P55344 173 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 TIMM10P62072 90 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 VLDLRP98155 873 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 GBE1Q04446 702 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 TFF3Q07654 80 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 C1orf61Q13536 156 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 DPYSL3Q14195 570 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 MXD4Q14582 209 aaPredicted RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 IHHQ14623 411 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 NDUFA9Q16795 377 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 IMMTQ16891 758 aaKnown RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 LRRC36Q1X8D7 754 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 FAM120AOSQ5T036 256 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 C1orf220Q5T0J3 134 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 PRAMEF5Q5TYX0 476 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 PRAMEF6Q5VXH4 476 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 IGFL3Q6UXB1 125 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 IL34Q6ZMJ4 242 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 CCDC80Q76M96 950 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 KIAA1328Q86T90 577 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 ZNF589Q86UQ0 364 aaPredicted RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 PPP1R27Q86WC6 154 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 SERPINA9Q86WD7 417 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 TGIF2LXQ8IUE1 241 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 TMEM123Q8N131 208 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 LINC01555Q8NAE3 123 aa2.03□□□□□ -2.08
ATM-230ENST00000640388 FAM83FQ8NEG4 500 aaPredicted RBP2.03□□□□□ -2.08
ATM-230ENST00000640388 FDCSPQ8NFU4 85 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms