RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 OR56B4Q8NH76 319 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 FAM3DQ96BQ1 224 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 SLC25A44Q96H78 314 aaPredicted RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 C20orf85Q9H1P6 137 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 NIPAL2Q9H841 368 aa19.18■□□□□ 0.66
CLN6-224ENST00000638076 CDV3Q9UKY7 258 aaKnown RBP19.18■□□□□ 0.66
CLN6-224ENST00000638076 KIF26BQ2KJY2 2108 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 ANKRD20A5PA0PJZ0 165 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 TTLL8A6PVC2 850 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 CTAG2O75638 210 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 RAG2P55895 527 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 Q5BKY6 102 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 ANKRD16Q6P6B7 361 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 PLCZ1Q86YW0 608 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 M1APQ8TC57 530 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 SLC25A43Q8WUT9 341 aaPredicted RBP19.17■□□□□ 0.66
CLN6-224ENST00000638076 GIMAP1Q8WWP7 306 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 OR2M2Q96R28 347 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 NKIRAS2Q9NYR9 191 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 A0A1W2PPL8 197 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 TRAF3IP2O43734 574 aaPredicted RBP19.17■□□□□ 0.66
CLN6-224ENST00000638076 IGHG1P01857 330 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 ISG15P05161 165 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 PGA4P0DJD7 388 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 PGA3P0DJD8 388 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 IGFBP3P17936 291 aaPredicted RBP19.17■□□□□ 0.66
CLN6-224ENST00000638076 LAP3P28838 519 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 NOXO1Q8NFA2 376 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 OR1J4Q8NGS1 313 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 PHF21AQ96BD5 680 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 ZBTB8AQ96BR9 441 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 ACTR6Q9GZN1 396 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 CDCP1Q9H5V8 836 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 CYB5R1Q9UHQ9 305 aa19.17■□□□□ 0.66
CLN6-224ENST00000638076 LOC101059948A0A1B0GTJ6 334 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 NAP1L6A6NFF2 107 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 FSTP19883 344 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 ACHEP22303 614 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 DCTDP32321 178 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 DNASE1L1P49184 302 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 GLT8D1Q68CQ7 371 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 FAM166AQ6J272 317 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 OR11G2Q8NGC1 345 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 OR11H7Q8NGC8 314 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 SLAMF6Q96DU3 332 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 BEX1Q9HBH7 125 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 ZNF275Q9NSD4 429 aaPredicted RBP19.16■□□□□ 0.66
CLN6-224ENST00000638076 HDGFL3Q9Y3E1 203 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 LOC100289279A0A1B0GTE1 492 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 RAMP1O60894 148 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 TPPPO94811 219 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 CCL3P10147 92 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 CARD17Q5XLA6 110 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 ZNF704Q6ZNC4 412 aaPredicted RBP19.16■□□□□ 0.66
CLN6-224ENST00000638076 BEST4Q8NFU0 473 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 DACT3Q96B18 629 aaPredicted RBP19.16■□□□□ 0.66
CLN6-224ENST00000638076 PISDQ9UG56 409 aa19.16■□□□□ 0.66
CLN6-224ENST00000638076 GGT3PA6NGU5 568 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 MASP2O00187 686 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 KLK2P20151 261 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 PSMB1P20618 241 aaKnown RBP19.15■□□□□ 0.66
CLN6-224ENST00000638076 SSR4P51571 173 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 FAAP20Q6NZ36 180 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 BIVMQ86UB2 503 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 OR51A2Q8NGJ7 313 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 ZFAND1Q8TCF1 268 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 OXGR1Q96P68 337 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 SEC61A2Q9H9S3 476 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 ZNF160Q9HCG1 818 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 DIABLOQ9NR28 239 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 FLVCR2Q9UPI3 526 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 EML6Q6ZMW3 1958 aa19.15■□□□□ 0.66
CLN6-224ENST00000638076 NSG1A0A0A6YYJ2 146 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 SULT2B1O00204 365 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 P2RY10O00398 339 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 ZNF43P17038 809 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 FOLR3P41439 243 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 MMP16P51512 607 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 TNK1Q13470 666 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 NDUFA5Q16718 116 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 ST3GAL2Q16842 350 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 TMEM244Q5VVB8 128 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 CD276Q5ZPR3 534 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 DNM1P46Q6ZS02 220 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 C1orf198Q9H425 327 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 ZNF222Q9UK12 451 aa19.14■□□□□ 0.66
CLN6-224ENST00000638076 TMEM272A0A1B0GTI8 110 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 LMX1BO60663 402 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 FKBP2P26885 142 aaKnown RBP19.14■□□□□ 0.65
CLN6-224ENST00000638076 HTR2CP28335 458 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 GPR85P60893 370 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 MFAP5Q13361 173 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 ELFN2Q5R3F8 820 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 GLYATL3Q5SZD4 288 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 OLFML2AQ68BL7 652 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 TCEAL6Q6IPX3 200 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 TMEM81Q6P7N7 255 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 OR10S1Q8NGN2 331 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 OR6X1Q8NH79 312 aa19.14■□□□□ 0.65
CLN6-224ENST00000638076 TCEAL3Q969E4 200 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms