RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 HTR5AP47898 357 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 PPP1CBP62140 327 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 AQP6Q13520 282 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 RIN1Q13671 783 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 TRIM25Q14258 630 aaKnown RBP11.81□□□□□ -0.52
PNKP-228ENST00000637325 PCGF3Q3KNV8 242 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 ELFN2Q5R3F8 820 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 FAM166AQ6J272 317 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 C1orf94Q6P1W5 598 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 LEG1Q6P5S2 330 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 PTCHD4Q6ZW05 846 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 ZNF101Q8IZC7 436 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 LINC00471Q8N535 108 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 SLC25A40Q8TBP6 338 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 SAMD8Q96LT4 415 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 LRGUKQ96M69 825 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 SNX18Q96RF0 628 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 OR2J1Q9GZK6 312 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 NUAK2Q9H093 628 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 DECR2Q9NUI1 292 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 PLEK2Q9NYT0 353 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 PLSCR5A0PG75 271 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 MPZL1O95297 269 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 TGFAP01135 160 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 IFNA2P01563 188 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 IGHV3-13P01766 116 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 TACSTD2P09758 323 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 COX5BP10606 129 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 MAGEB1P43366 347 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 GSSP48637 474 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 ZNF81P51508 661 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 LSM6P62312 80 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 CCL8P80075 99 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 TEKQ02763 1124 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 TSPAN31Q12999 210 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 FAM98BQ52LJ0 330 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 PGBD2Q6P3X8 592 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 OR52L1Q8NGH7 329 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 OR4K13Q8NH42 304 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 KLF14Q8TD94 323 aaPredicted RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 POP5Q969H6 163 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 MSI2Q96DH6 328 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 MARS2Q96GW9 593 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 BEX2Q9BXY8 128 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 MAGIXQ9H6Y5 334 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 ASH2LQ9UBL3 628 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 CDC42EP3Q9UKI2 254 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 PRPF19Q9UMS4 504 aaKnown RBP11.8□□□□□ -0.52
PNKP-228ENST00000637325 GRIP1Q9Y3R0 1128 aa11.8□□□□□ -0.52
PNKP-228ENST00000637325 ARPC3O15145 178 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 PPIHO43447 177 aaKnown RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 SPRY3O43610 288 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 IDH3BO43837 385 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 CDC14BO60729 498 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 LILRA1O75019 489 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 NCR1O76036 304 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 CCNB2O95067 398 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 NGFP01138 241 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 HIST1H1CP16403 213 aaKnown RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 LIPAP38571 399 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 MPV17P39210 176 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 TMEM33P57088 247 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 MRPS11P82912 194 aaKnown RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 TRIP10Q15642 601 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 TSTQ16762 297 aaKnown RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 MBNL2Q5VZF2 373 aaKnown RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 OTPQ5XKR4 325 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 LCN8Q6JVE9 175 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 RPL13AP3Q6NVV1 102 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 PGM2L1Q6PCE3 622 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 OR9Q2Q8NGE9 314 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 IPCEF1Q8WWN9 437 aaPredicted RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 HPS1Q92902 700 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 YIPF5Q969M3 257 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 TSSK2Q96PF2 358 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 NMNAT3Q96T66 252 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 CYSLTR2Q9NS75 346 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 ZNF275Q9NSD4 429 aaPredicted RBP11.79□□□□□ -0.52
PNKP-228ENST00000637325 TMEM160Q9NX00 188 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 NKIRAS2Q9NYR9 191 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 B9D1Q9UPM9 204 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 LYVE1Q9Y5Y7 322 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 TANC2Q9HCD6 1990 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 DOCK11Q5JSL3 2073 aa11.79□□□□□ -0.52
PNKP-228ENST00000637325 TCRBV5S2A0A599 114 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 KIAA1324LA8MWY0 1029 aaPredicted RBP11.78□□□□□ -0.52
PNKP-228ENST00000637325 H3BSA7 217 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 TIMM8AO60220 97 aaPredicted RBP11.78□□□□□ -0.52
PNKP-228ENST00000637325 GPANK1O95872 356 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 HLA-DQA2P01906 255 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 T-ENOLP0DO92 83 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 GSTM3P21266 225 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 HMGA2P52926 109 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms