RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 OR52E2Q8NGJ4 325 aa13.39□□□□□ -0.27
LINC00339-209ENST00000635450 TSSK6Q9BXA6 273 aa13.39□□□□□ -0.27
LINC00339-209ENST00000635450 OR2H1Q9GZK4 316 aa13.39□□□□□ -0.27
LINC00339-209ENST00000635450 SRA1Q9HD15 236 aaKnown RBP13.39□□□□□ -0.27
LINC00339-209ENST00000635450 PDP1Q9P0J1 537 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-209ENST00000635450 DNAJB9Q9UBS3 223 aa13.39□□□□□ -0.27
LINC00339-209ENST00000635450 BAIAP2Q9UQB8 552 aa13.39□□□□□ -0.27
LINC00339-209ENST00000635450 POLR1DQ9Y2S0 133 aa13.39□□□□□ -0.27
LINC00339-209ENST00000635450 IGHV4-61A0A0C4DH41 118 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 TMEM129A0AVI4 362 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 FAM157BP0CG42 384 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 SELENOVP59797 346 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 LSM6P62312 80 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 ENDOGQ14249 297 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 GGTLC2Q14390 218 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 SLC35F1Q5T1Q4 408 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 RGS7BPQ6MZT1 257 aaPredicted RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 UGT2A3Q6UWM9 527 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 UNQ6126/PRO20091Q6UXV3 157 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 PAPD5Q8NDF8 572 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 CPEB3Q8NE35 698 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 TEX47Q8TBZ9 253 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 MRPL24Q96A35 216 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 FEVQ99581 238 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 SOX7Q9BT81 388 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 PLA2G12AQ9BZM1 189 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 BCL2L14Q9BZR8 327 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 OR51B6Q9H340 312 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 ZNF556Q9HAH1 456 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 DYNLRB1Q9NP97 96 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 RPRD1BQ9NQG5 326 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 EIF3KQ9UBQ5 218 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 NDRG4Q9ULP0 352 aaKnown RBP13.38□□□□□ -0.27
LINC00339-209ENST00000635450 B9D1Q9UPM9 204 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 FKBP7Q9Y680 259 aa13.38□□□□□ -0.27
LINC00339-209ENST00000635450 C5orf49A4QMS7 147 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 BHLHE40O14503 412 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 DEAF1O75398 565 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-209ENST00000635450 SOX14O95416 240 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 SCG5P05408 212 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 LCKP06239 509 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 ERCC1P07992 297 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-209ENST00000635450 ANXA8P13928 327 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 USF1P22415 310 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-209ENST00000635450 PPOXP50336 477 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 GLO1Q04760 184 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 AQP6Q13520 282 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 CD300LDQ6UXZ3 194 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 CXXC5Q7LFL8 322 aaKnown RBP13.37□□□□□ -0.27
LINC00339-209ENST00000635450 PAQR4Q8N4S7 273 aaPredicted RBP13.37□□□□□ -0.27
LINC00339-209ENST00000635450 ICA1LQ8NDH6 482 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 OR2T33Q8NG76 320 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 OR8D4Q8NGM9 314 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 TSSK2Q96PF2 358 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 NIPSNAP1Q9BPW8 284 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 RAB1BQ9H0U4 201 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 WNT5BQ9H1J7 359 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 KLHL21Q9UJP4 597 aa13.37□□□□□ -0.27
LINC00339-209ENST00000635450 OR6C68A6NDL8 312 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 H3BN98 237 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 EBAG9O00559 213 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 SGCEO43556 437 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 DOK2O60496 412 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 TIPRLO75663 272 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 MPZL1O95297 269 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 IFNGP01579 166 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 HLA-DQA2P01906 255 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 CSF3P09919 207 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 NR4A2P43354 598 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 EVX1P49640 407 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 PDLIM4P50479 330 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 UCP2P55851 309 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 KCNMB1Q16558 191 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 SLC36A3Q495N2 470 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 ZNF774Q6NX45 483 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 ARL9Q6T311 187 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 IL17RELQ6ZVW7 336 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.36□□□□□ -0.27
LINC00339-209ENST00000635450 TMEM179BQ7Z7N9 219 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 OR6V1Q8N148 313 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 LNX2Q8N448 690 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 C11orf40Q8WZ69 217 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 SLCO4A1Q96BD0 722 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 POM121L2Q96KW2 1035 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 DOK1Q99704 481 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 MRPL37Q9BZE1 423 aaKnown RBP13.36□□□□□ -0.27
LINC00339-209ENST00000635450 BPESC1Q9GZL8 116 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 FN3KQ9H479 309 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 ARMC1Q9NVT9 282 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 MYEF2Q9P2K5 600 aaKnown RBP13.36□□□□□ -0.27
LINC00339-209ENST00000635450 DUSP13Q9UII6 198 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 FBN3Q75N90 2809 aa13.36□□□□□ -0.27
LINC00339-209ENST00000635450 IGLV1-36A0A0B4J1U3 117 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 M0R233 179 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 DCTN6O00399 190 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 SYNGR3O43761 229 aa13.35□□□□□ -0.27
LINC00339-209ENST00000635450 COX5BP10606 129 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms