RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OSTF1Q92882 214 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ADIPOR1Q96A54 375 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 HAUS1Q96CS2 278 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 NTNG2Q96CW9 530 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 TM4SF19Q96DZ7 209 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 TTC25Q96NG3 672 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 PPP1R2P1Q96PQ5 205 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 OR4F4Q96R69 305 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF607Q96SK3 696 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 FOXC2Q99958 501 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 HES7Q9BYE0 225 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 BARHL1Q9BZE3 327 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 AICDAQ9GZX7 198 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 DRC3Q9H069 523 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 NAT10Q9H0A0 1025 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 MOB1AQ9H8S9 216 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZDHHC11Q9H8X9 412 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 GORASP2Q9H8Y8 452 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SP140LQ9H930 580 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 LRRC40Q9H9A6 602 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 NHEJ1Q9H9Q4 299 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SH2D2AQ9NP31 389 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZDHHC18Q9NUE0 388 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 IFNKQ9P0W0 207 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SPATA7Q9P0W8 599 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF282Q9UDV7 671 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SEC14L4Q9UDX3 406 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SEC14L3Q9UDX4 400 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 CRLS1Q9UJA2 301 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 C3orf18Q9UK00 162 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF223Q9UK11 482 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SPATA2Q9UM82 520 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 TFR2Q9UP52 801 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ASF1AQ9Y294 204 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 FAM215AQ9Y5M1 114 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ALG6Q9Y672 507 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 HIVEP2P31629 2446 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 IGLV4-3A0A075B6K6 122 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 C15orf38-AP3S2A0A0A6YYH1 394 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 NSG1A0A0A6YYJ2 146 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PPIAL4CA0A0B4J2A2 164 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TRGV8A0A0C4DH27 118 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A0G2JMM0 328 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A1W2PPB8 328 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A1W2PPR1 153 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A1W2PRS3 328 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CTAGE15A4D2H0 777 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 KIR3DP1A8MWS1 328 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PPIAL4DF5H284 164 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 H0YGG7 62 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 GFYI3L273 518 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CCL21O00585 134 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PRMT5O14744 637 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 HAT1O14929 419 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SPOPO43791 374 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TYROBPO43914 113 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 BCAS1O75363 584 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PDE5AO76074 875 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 GLSO94925 669 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 DUS4LO95620 317 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TSPAN12O95859 305 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 IGHG3P01860 377 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 MT-ND1P03886 318 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 RPN2P04844 631 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 FCGR3AP08637 254 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 HOXD4P09016 255 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 OR56A5P0C7T3 313 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PPIAL4GP0DN37 164 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CD1EP15812 388 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 RPS2P15880 293 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PAX7P23759 505 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 IMPA1P29218 277 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CHI3L1P36222 383 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SSR1P43307 286 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 MAGEA3P43357 314 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 BDKRB1P46663 353 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TTPAP49638 278 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PPT1P50897 306 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC7A2P52569 658 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 RIDAP52758 137 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 NDUFV3P56181 108 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 VSX2P58304 361 aaPredicted RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 EIF3EP60228 445 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TBPL1P62380 186 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CSNK1G2P78368 415 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ARG2P78540 354 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF85Q03923 595 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 TLE4Q04727 773 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 PRDX1Q06830 199 aaKnown RBP1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CDH17Q12864 832 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 IL24Q13007 206 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 SELPLGQ14242 412 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 KCNJ11Q14654 390 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 FBXL19-AS1Q494R0 122 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ACER2Q5QJU3 275 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 LINC00242Q5T6M2 205 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 HACD2Q6Y1H2 254 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 CYHR1Q6ZMK1 362 aa1.98□□□□□ -2.09
SMARCB1-208ENST00000634926 ANKRD37Q7Z713 158 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms