RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TRIP6Q15654 476 aaKnown RBP19.6■□□□□ 0.73
PNKP-220ENST00000627232 LRFN4Q6PJG9 635 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 CORO6Q6QEF8 472 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 KLHL24Q6TFL4 600 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 PLET1Q6UQ28 207 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 OR2AJ1Q8NGZ0 328 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 TMEM54Q969K7 222 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 SF3B5Q9BWJ5 86 aaKnown RBP19.6■□□□□ 0.73
PNKP-220ENST00000627232 OR2B2Q9GZK3 357 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 NIPAL2Q9H841 368 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 SEC61A2Q9H9S3 476 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 STMN3Q9NZ72 180 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 STEAP1Q9UHE8 339 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 LHFPL6Q9Y693 200 aa19.6■□□□□ 0.73
PNKP-220ENST00000627232 DOCK10Q96BY6 2186 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 MEIOCA2RUB1 952 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 NPIPA2E9PIF3 369 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 NPIPA3F8WFD2 350 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 LANCL1O43813 399 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 TRAPPC2P0DI81 140 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 TRAPPC2BP0DI82 140 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 MNDAP41218 407 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 TPTEP56180 551 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 TOMM20Q15388 145 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 CARTPTQ16568 116 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 C10orf128Q5T292 105 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 BCL2L15Q5TBC7 163 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 PIP4P1Q86T03 277 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 OR14L1PQ8NHC6 308 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 YIPF5Q969M3 257 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 INTS12Q96CB8 462 aaKnown RBP19.59■□□□□ 0.73
PNKP-220ENST00000627232 S100A16Q96FQ6 103 aaKnown RBP19.59■□□□□ 0.73
PNKP-220ENST00000627232 FAM206AQ9NX38 181 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 GLTPQ9NZD2 209 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 CKLFQ9UBR5 152 aa19.59■□□□□ 0.73
PNKP-220ENST00000627232 GDF2Q9UK05 429 aaPredicted RBP19.59■□□□□ 0.73
PNKP-220ENST00000627232 NCKAP5O14513 1909 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 CD37P11049 281 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 IGFBP3P17936 291 aaPredicted RBP19.58■□□□□ 0.73
PNKP-220ENST00000627232 CSRP1P21291 193 aaKnown RBP19.58■□□□□ 0.73
PNKP-220ENST00000627232 CASRP41180 1078 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 CSNK1A1P48729 337 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 ART1P52961 327 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 SUCLG1P53597 346 aaKnown RBP19.58■□□□□ 0.73
PNKP-220ENST00000627232 CLDN20P56880 219 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 RAC3P60763 192 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 OC90Q02509 493 aaPredicted RBP19.58■□□□□ 0.73
PNKP-220ENST00000627232 GPR176Q14439 515 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 CSRP2Q16527 193 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 UBE2J2Q8N2K1 259 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 OR9K2Q8NGE7 335 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 OR10S1Q8NGN2 331 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 C15orf40Q8WUR7 153 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 SMIM4Q8WVI0 70 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 EMC7Q9NPA0 242 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 DEPPQ9NTK1 212 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 ABI3Q9P2A4 366 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 POLR1DQ9Y2S0 133 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 CACNA1CQ13936 2221 aa19.58■□□□□ 0.73
PNKP-220ENST00000627232 VCANP13611 3396 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 LOC107986453A0A1B0GWG9 222 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 ZNF878C9JN71 531 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 STMND1H3BQB6 276 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 TNFSF11O14788 317 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 TFECO14948 347 aaPredicted RBP19.57■□□□□ 0.72
PNKP-220ENST00000627232 EIF2B2P49770 351 aaKnown RBP19.57■□□□□ 0.72
PNKP-220ENST00000627232 CLDN12P56749 244 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 MFAP5Q13361 173 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 SLC36A2Q495M3 483 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 ABHD17BQ5VST6 288 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 FOXL2NBQ6ZUU3 175 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 ESPNLQ6ZVH7 1005 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 YRDCQ86U90 279 aaKnown RBP19.57■□□□□ 0.72
PNKP-220ENST00000627232 DNAAF1Q8NEP3 725 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 SYNPRQ8TBG9 265 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 PNPLA2Q96AD5 504 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 HAVCR1Q96D42 359 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 OR2M2Q96R28 347 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 C7orf50Q9BRJ6 194 aaKnown RBP19.57■□□□□ 0.72
PNKP-220ENST00000627232 MOB1AQ9H8S9 216 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 ZFP64Q9NPA5 681 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 LRFN1Q9P244 771 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 BOKQ9UMX3 212 aaPredicted RBP19.57■□□□□ 0.72
PNKP-220ENST00000627232 CACNG2Q9Y698 323 aa19.57■□□□□ 0.72
PNKP-220ENST00000627232 MEGF11A6BM72 1044 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 H3BSH0 61 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 EIF1AYO14602 144 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 LSM6P62312 80 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 DCAF10Q5QP82 559 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 RSBN1Q5VWQ0 802 aaPredicted RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 ELMOD2Q8IZ81 293 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 TMEM123Q8N131 208 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 OR13C3Q8NGS6 347 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 ZFP3Q96NJ6 502 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 UCN2Q96RP3 112 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 MARVELD1Q9BSK0 173 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 PLEKHA1Q9HB21 404 aa19.56■□□□□ 0.72
PNKP-220ENST00000627232 MRPS7Q9Y2R9 242 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 MRPS18BQ9Y676 258 aaKnown RBP19.56■□□□□ 0.72
PNKP-220ENST00000627232 BDP1A6H8Y1 2624 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms