RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 MRTO4Q9UKD2 239 aaKnown RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 DCDC2BA2VCK2 349 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 TMEM150CB9EJG8 249 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 SMAD9O15198 467 aaKnown RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 AQP8O94778 261 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 PMS2P2O95744 297 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 AMY2AP04746 511 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 MELTFP08582 738 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 BLKP51451 505 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 CCR5P51681 352 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 NR0B1P51843 470 aaKnown RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 RIDAP52758 137 aaKnown RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 TOMM20Q15388 145 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 MOGAT2Q3SYC2 334 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 OR10K2Q6IF99 312 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 TTLL10Q6ZVT0 673 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 C9orf40Q8IXQ3 194 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 C12orf45Q8N5I9 185 aaPredicted RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 TMEM229BQ8NBD8 167 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 OR6K3Q8NGY3 331 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 KLHDC7BQ96G42 594 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 SLC25A44Q96H78 314 aaPredicted RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 SLC38A3Q99624 504 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
LINC00552-201ENST00000625151 POTEKPQ9BYX7 375 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 TXNIPQ9H3M7 391 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 GPR160Q9UJ42 338 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 FBXO4Q9UKT5 387 aa13.66□□□□□ -0.22
LINC00552-201ENST00000625151 FASLGP48023 281 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 SQSTM1Q13501 440 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 EBPQ15125 230 aaKnown RBP13.65□□□□□ -0.22
LINC00552-201ENST00000625151 KCTD18Q6PI47 426 aaPredicted RBP13.65□□□□□ -0.22
LINC00552-201ENST00000625151 C17orf107Q6ZR85 190 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 PDZD9Q8IXQ8 264 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 ZNF454Q8N9F8 522 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 RELL2Q8NC24 303 aaPredicted RBP13.65□□□□□ -0.22
LINC00552-201ENST00000625151 OR1J2Q8NGS2 313 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 CKLFQ9UBR5 152 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 FITM1A5D6W6 292 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 SULT1C2O00338 296 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 MT-ATP6P00846 226 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 CD2P06729 351 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 ZNF735P0CB33 412 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 GP1BBP13224 206 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 SPOCK1Q08629 439 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 ATPAF1Q5TC12 328 aaPredicted RBP13.65□□□□□ -0.22
LINC00552-201ENST00000625151 STEAP2Q8NFT2 490 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 CCDC107Q8WV48 283 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 CMKLR1Q99788 373 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 PDE7BQ9NP56 450 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 PRDM6Q9NQX0 595 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 UPB1Q9UBR1 384 aa13.65□□□□□ -0.22
LINC00552-201ENST00000625151 IGKV3D-11A0A0A0MRZ8 115 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 TMED7-TICAM2A0A0A6YYA0 188 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 ALG1L2C9J202 215 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 TSPAN2O60636 221 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 LMX1BO60663 402 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 NPIPB7O75200 414 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 DXOO77932 396 aaKnown RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 FSTP19883 344 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 PRAMEF17Q5VTA0 474 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 HSD17B13Q7Z5P4 300 aaPredicted RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 KDM8Q8N371 416 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 FAM174AQ8TBP5 190 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 TBL1XR1Q9BZK7 514 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 CUTCQ9NTM9 273 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 KLK13Q9UKR3 277 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 COA3Q9Y2R0 106 aaPredicted RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 NOSIPQ9Y314 301 aaKnown RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 TMED7Q9Y3B3 224 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 EMC9Q9Y3B6 208 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 SDC3O75056 442 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 SRSF10O75494 262 aaKnown RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 HPP00738 406 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 HLA-DOBP13765 273 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 ZNF28P17035 718 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 PGCP20142 388 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 PMPCAQ10713 525 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 ADGRE4PQ86SQ3 457 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 OR52N5Q8NH56 324 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 SLC25A21Q9BQT8 299 aaPredicted RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 FARSAQ9Y285 508 aaKnown RBP13.64□□□□□ -0.23
LINC00552-201ENST00000625151 MMACHCQ9Y4U1 282 aa13.64□□□□□ -0.23
LINC00552-201ENST00000625151 A0A1W2PPC4 97 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 LDLRAD4O15165 306 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 ACHEP22303 614 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 PLCXD2Q0VAA5 305 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 SMAD2Q15796 467 aaKnown RBP13.63□□□□□ -0.23
LINC00552-201ENST00000625151 SCGB2B2Q4G0G5 96 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 C1orf140Q5VVS0 124 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 Q6ZS52 159 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 ZNF546Q86UE3 836 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 JAGN1Q8N5M9 183 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 OR4S1Q8NGB4 309 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 OR13C3Q8NGS6 347 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 OR13C8Q8NGS7 320 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 ASB13Q8WXK3 278 aa13.63□□□□□ -0.23
LINC00552-201ENST00000625151 HLA-CQ95604 372 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms