RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 RHOFQ9HBH0 211 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 TAS2R4Q9NYW5 299 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 LRIT1Q9P2V4 623 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 LPAR3Q9UBY5 353 aa12.71□□□□□ -0.38
LDB3-209ENST00000623056 ALPK2Q86TB3 2170 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 TRBV6-7A0A0A0MS04 114 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 C5orf52A6NGY3 159 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 EIF1AYO14602 144 aaKnown RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 FOXS1O43638 330 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 PNPP00491 289 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 ERCC1P07992 297 aaPredicted RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 GUSBP08236 651 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 IFI6P09912 130 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 S1PR1P21453 382 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 PTAFRP25105 342 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 SERPINF1P36955 418 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 EIF1AXP47813 144 aaKnown RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 RBM39Q14498 530 aaKnown RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 NNATQ16517 81 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 MEP1BQ16820 701 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 PLPP4Q5VZY2 271 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 DRAM2Q6UX65 266 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 TMPPEQ6ZT21 453 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 SLC35D2Q76EJ3 337 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 ZSCAN4Q8NAM6 433 aaPredicted RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 OTOSQ8NHW6 89 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 RNF126Q9BV68 326 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 SYT4Q9H2B2 425 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 TBC1D29Q9UFV1 150 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 SERINC4A6NH21 518 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 HRKO00198 91 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 UBE2CO00762 179 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 PHYHO14832 338 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 LDLRAD4O15165 306 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 EIF1BO60739 113 aaKnown RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 STK17BO94768 372 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 AKR1C4P17516 323 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 EIF1P41567 113 aaKnown RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 ARRB1P49407 418 aaPredicted RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 RPL18Q07020 188 aaKnown RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 SMCO1Q147U7 214 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 FIGLAQ6QHK4 219 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 NPSR1Q6W5P4 371 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 TMEM200AQ86VY9 491 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 CA13Q8N1Q1 262 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 OR4C3Q8NH37 302 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 OR8B4Q96RC9 309 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 ZNF587Q96SQ5 575 aaPredicted RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 LPAR4Q99677 370 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 CMKLR1Q99788 373 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 KXD1Q9BQD3 176 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 MMP25Q9NPA2 562 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 NIT2Q9NQR4 276 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 PRMT8Q9NR22 394 aaPredicted RBP12.7□□□□□ -0.38
LDB3-209ENST00000623056 CKLFQ9UBR5 152 aa12.7□□□□□ -0.38
LDB3-209ENST00000623056 CHD9Q3L8U1 2897 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 MYO7AQ13402 2215 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 TRBV23OR9-2A0A075B6M9 112 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 DCDC2BA2VCK2 349 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 C1orf196B1AJZ1 125 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 EFSO43281 561 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 DUS4LO95620 317 aaKnown RBP12.69□□□□□ -0.38
LDB3-209ENST00000623056 RENP00797 406 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 ASAH2BP0C7U1 165 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 MPZP25189 248 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 ABCD3P28288 659 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 CAV2P51636 162 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 FJX1Q86VR8 437 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 ACBD4Q8NC06 268 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 NUDCD2Q8WVJ2 157 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 ASB5Q8WWX0 329 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 LIPHQ8WWY8 451 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 SLC22A18Q96BI1 424 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 SPACA7Q96KW9 195 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 VSTM2LQ96N03 204 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 NUDT9Q9BW91 350 aa12.69□□□□□ -0.38
LDB3-209ENST00000623056 A0A0A6YYH2 397 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 A6NJ64 397 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 DBX1A6NMT0 343 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 H0YGG7 62 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 TNFSF14O43557 240 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 SLC35E2P0CK97 266 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 IGFBP3P17936 291 aaPredicted RBP12.68□□□□□ -0.38
LDB3-209ENST00000623056 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
LDB3-209ENST00000623056 ARF3P61204 181 aaPredicted RBP12.68□□□□□ -0.38
LDB3-209ENST00000623056 SLC22A6Q4U2R8 563 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 PHF19Q5T6S3 580 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 OR52W1Q6IF63 320 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 FAHD2BQ6P2I3 314 aaPredicted RBP12.68□□□□□ -0.38
LDB3-209ENST00000623056 SLC29A4Q7RTT9 530 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 GVQW1Q8N7I0 195 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 OR51A2Q8NGJ7 313 aa12.68□□□□□ -0.38
LDB3-209ENST00000623056 FAHD2AQ96GK7 314 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms