RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CLDN6P56747 220 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 FOXO1Q12778 655 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 TAF13Q15543 124 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 BCL2A1Q16548 175 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 LRFN4Q6PJG9 635 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 GJC3Q8NFK1 279 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 ENKURQ8TC29 256 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 AGAP4Q96P64 663 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 OR2M2Q96R28 347 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 SLC17A5Q9NRA2 495 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 CENPMQ9NSP4 180 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 STEAP1Q9UHE8 339 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 GDF2Q9UK05 429 aaPredicted RBP14.52□□□□□ -0.08
LDB3-208ENST00000623007 ING1Q9UK53 422 aaPredicted RBP14.52□□□□□ -0.08
LDB3-208ENST00000623007 GTF2A1LQ9UNN4 478 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 EML6Q6ZMW3 1958 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 OR6C65A6NJZ3 312 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 EIF1AYO14602 144 aaKnown RBP14.52□□□□□ -0.09
LDB3-208ENST00000623007 GSTZ1O43708 216 aaPredicted RBP14.52□□□□□ -0.09
LDB3-208ENST00000623007 MPZL1O95297 269 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 OPN1LWP04000 364 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 EIF4EP06730 217 aaKnown RBP14.52□□□□□ -0.09
LDB3-208ENST00000623007 PSKH1P11801 424 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 CTSSP25774 331 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 MNDAP41218 407 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 NBL1P41271 181 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 SOX2P48431 317 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 GFRA1P56159 465 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 PSMA6P60900 246 aaKnown RBP14.52□□□□□ -0.09
LDB3-208ENST00000623007 FOXK1P85037 733 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 STK11Q15831 433 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 RIPPLY2Q5TAB7 128 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 ABLIM2Q6H8Q1 611 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 LRRTM1Q86UE6 522 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 GGNQ86UU5 652 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 ELMOD2Q8IZ81 293 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 OR4M1Q8NGD0 313 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 DEDD2Q8WXF8 326 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 ZNF703Q9H7S9 590 aaPredicted RBP14.52□□□□□ -0.09
LDB3-208ENST00000623007 NUFIP1Q9UHK0 495 aaKnown RBP14.52□□□□□ -0.09
LDB3-208ENST00000623007 EMC9Q9Y3B6 208 aa14.52□□□□□ -0.09
LDB3-208ENST00000623007 IGKV1D-43A0A0B4J1Z2 117 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 OR5H15A6NDH6 313 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 ZNF814B7Z6K7 855 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 PNPP00491 289 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 MAP2K3P46734 347 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 ART1P52961 327 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 TAB1Q15750 504 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 YRDCQ86U90 279 aaKnown RBP14.51□□□□□ -0.09
LDB3-208ENST00000623007 C20orf196Q8IYI0 205 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 TMEM123Q8N131 208 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 GALNT16Q8N428 558 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 LGALS14Q8TCE9 139 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 ASB5Q8WWX0 329 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 ADGRG7Q96K78 797 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 FOXN4Q96NZ1 517 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 LIN7BQ9HAP6 207 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 G6PC2Q9NQR9 355 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 RBFOX1Q9NWB1 397 aaKnown RBP14.51□□□□□ -0.09
LDB3-208ENST00000623007 PCDHGA9Q9Y5G4 932 aaKnown RBP14.51□□□□□ -0.09
LDB3-208ENST00000623007 USP34Q70CQ2 3546 aa14.51□□□□□ -0.09
LDB3-208ENST00000623007 DHHO43323 396 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 ERCC1P07992 297 aaPredicted RBP14.5□□□□□ -0.09
LDB3-208ENST00000623007 CEACAM1P13688 526 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 AP3S2P59780 193 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 MRPS34P82930 218 aaKnown RBP14.5□□□□□ -0.09
LDB3-208ENST00000623007 P2RY14Q15391 338 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 NRN1LQ496H8 165 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 CARD17Q5XLA6 110 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 SPINK14Q6IE38 97 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 SLC25A25Q6KCM7 469 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 CDH24Q86UP0 819 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 LINC00346Q8IVM7 164 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 MEIOBQ8N635 442 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 TMEM178AQ8NBL3 297 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 DUSP18Q8NEJ0 188 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 OR13C3Q8NGS6 347 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 TMEM45BQ96B21 275 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 THAP7Q9BT49 309 aaPredicted RBP14.5□□□□□ -0.09
LDB3-208ENST00000623007 ULBP2Q9BZM5 246 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 HDHD2Q9H0R4 259 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 DEPPQ9NTK1 212 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 DDX28Q9NUL7 540 aaKnown RBP14.5□□□□□ -0.09
LDB3-208ENST00000623007 FAM206AQ9NX38 181 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 RHBDL2Q9NX52 303 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 COPZ2Q9P299 210 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 FOXD3Q9UJU5 478 aaPredicted RBP14.5□□□□□ -0.09
LDB3-208ENST00000623007 LHFPL6Q9Y693 200 aa14.5□□□□□ -0.09
LDB3-208ENST00000623007 ACOT7O00154 380 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SMAD9O15198 467 aaKnown RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 NME2P1O60361 137 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 CYTIPO60759 359 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 ECDO95905 644 aaPredicted RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 PAHP00439 452 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 CD37P11049 281 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SNRPBP14678 240 aaKnown RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 NME2P22392 152 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 TCF15Q12870 199 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 MFAP5Q13361 173 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 PLET1Q6UQ28 207 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms