RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ACAA2P42765 397 aaKnown RBP11.62□□□□□ -0.55
MSH6-215ENST00000622629 ZNF616Q08AN1 781 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 TOMM34Q15785 309 aaPredicted RBP11.62□□□□□ -0.55
MSH6-215ENST00000622629 UNQ6126/PRO20091Q6UXV3 157 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 LIX1LQ8IVB5 337 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 OR10K1Q8NGX5 313 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 OTOSQ8NHW6 89 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 ZPLD1Q8TCW7 415 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 PAQR8Q8TEZ7 354 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 WWTR1Q9GZV5 400 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 HAO2Q9NYQ3 351 aa11.62□□□□□ -0.55
MSH6-215ENST00000622629 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 A0A1B0GUH1 482 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 A6NJ64 397 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 RGS11O94810 467 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 LPLP06858 475 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 CT45A8P0DMV1 189 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 CT45A9P0DMV2 189 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 GABREP78334 506 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 FMODQ06828 376 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 CT45A2Q5DJT8 189 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 GLIPR1L1Q6UWM5 242 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 ZNF321PQ8N8H1 164 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 OR52N5Q8NH56 324 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 OR51E1Q8TCB6 317 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 RBPMSQ93062 196 aaKnown RBP11.61□□□□□ -0.55
MSH6-215ENST00000622629 BORCS8Q96FH0 119 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 OR8B4Q96RC9 309 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 CHRDQ9H2X0 955 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 B3GALT1Q9Y5Z6 326 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 ABCA7Q8IZY2 2146 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 F8W036 122 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 LAMTOR5O43504 91 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 F10P00742 488 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 IGKV1D-16P01601 117 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 CTSBP07858 339 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 POU2F2P09086 479 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 BLVRBP30043 206 aaPredicted RBP11.61□□□□□ -0.55
MSH6-215ENST00000622629 DUSP3P51452 185 aaPredicted RBP11.61□□□□□ -0.55
MSH6-215ENST00000622629 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 ETFDHQ16134 617 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 TEX261Q6UWH6 196 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 NPSR1Q6W5P4 371 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 LSMEM1Q8N8F7 131 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 SLAMF6Q96DU3 332 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 PILRAQ9UKJ1 303 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 U3KQ87 197 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 METTL12A8MUP2 240 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 SIGLEC6O43699 453 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 LUMP51884 338 aaPredicted RBP11.61□□□□□ -0.55
MSH6-215ENST00000622629 ARHGDIBP52566 201 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 PNLIPRP2P54317 469 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 PER3P56645 1201 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 NR0B2Q15466 257 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 GSG1Q2KHT4 349 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 PDSS1Q5T2R2 415 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 TMUB2Q71RG4 321 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 OR2AK2Q8NG84 335 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 MVB12AQ96EY5 273 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 PHF7Q9BWX1 381 aaPredicted RBP11.61□□□□□ -0.55
MSH6-215ENST00000622629 SMIM3Q9BZL3 60 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 SLC5A7Q9GZV3 580 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 TAS2R5Q9NYW4 299 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 MED12Q93074 2177 aa11.61□□□□□ -0.55
MSH6-215ENST00000622629 FADS1O60427 444 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 PMS2P2O95744 297 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 NME1P15531 152 aaKnown RBP11.6□□□□□ -0.55
MSH6-215ENST00000622629 ZNF16P17020 682 aaPredicted RBP11.6□□□□□ -0.55
MSH6-215ENST00000622629 DPP4P27487 766 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 GNRHRP30968 328 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 NPY4RP50391 375 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 GAB4Q2WGN9 574 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 C4orf45Q96LM5 186 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 TSPAN32Q96QS1 320 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 VRK1Q99986 396 aaPredicted RBP11.6□□□□□ -0.55
MSH6-215ENST00000622629 DUSP23Q9BVJ7 150 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 TMEM74BQ9NUR3 256 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 MRM2Q9UI43 246 aaKnown RBP11.6□□□□□ -0.55
MSH6-215ENST00000622629 RAB22AQ9UL26 194 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 LILRA5A6NI73 299 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 OGG1O15527 345 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 XRCC3O43542 346 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 ZIC2O95409 532 aaPredicted RBP11.6□□□□□ -0.55
MSH6-215ENST00000622629 HPXP02790 462 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 IFITM2Q01629 132 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 C9orf135Q5VTT2 229 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 OPN5Q6U736 354 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 MFSD8Q8NHS3 518 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 S1PR5Q9H228 398 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 KCNK15Q9H427 330 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 CHST11Q9NPF2 352 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 NSG1A0A0A6YYJ2 146 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 FCGR2AP12318 317 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 ACHEP22303 614 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 SLC25A1P53007 311 aa11.6□□□□□ -0.55
MSH6-215ENST00000622629 ZNF687Q8N1G0 1237 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms