RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 Q499Y3 187 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 IDNKQ5T6J7 187 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 MZT2AQ6P582 158 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 CCDC190Q86UF4 302 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 CATSPERDQ86XM0 798 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 PARP16Q8N5Y8 322 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 DERL3Q96Q80 235 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 SLC30A2Q9BRI3 323 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 PRRG4Q9BZD6 226 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 COMMD3Q9UBI1 195 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 SLC22A13Q9Y226 551 aa18.98■□□□□ 0.63
SPAST-204ENST00000621856 PHF3Q92576 2039 aaKnown RBP18.98■□□□□ 0.63
SPAST-204ENST00000621856 LOC110117498-PIK3R3F6TDL0 507 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 TFECO14948 347 aaPredicted RBP18.97■□□□□ 0.63
SPAST-204ENST00000621856 OCM2P0CE71 109 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 CD40LGP29965 261 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 ETV6P41212 452 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 MAGEB1P43366 347 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 C3AR1Q16581 482 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 KLHL24Q6TFL4 600 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 CFAP77Q6ZQR2 320 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 CHMP1BQ7LBR1 199 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 NR2C2APQ86WQ0 139 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 RDH10Q8IZV5 341 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 GPR137CQ8N3F9 429 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 GPR148Q8TDV2 347 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 WDFY2Q96P53 400 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 NELFAQ9H3P2 528 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 B3GAT2Q9NPZ5 323 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 ASH2LQ9UBL3 628 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 B3GNT3Q9Y2A9 372 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 EMC9Q9Y3B6 208 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 TRBV5-5A0A0J9YX44 114 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 H3BSH0 61 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 GPR171O14626 319 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 LSM6P62312 80 aaKnown RBP18.97■□□□□ 0.63
SPAST-204ENST00000621856 FOXL2NBQ6ZUU3 175 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 SNIP1Q8TAD8 396 aaKnown RBP18.97■□□□□ 0.63
SPAST-204ENST00000621856 MIXL1Q9H2W2 232 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 ZDHHC11Q9H8X9 412 aa18.97■□□□□ 0.63
SPAST-204ENST00000621856 ZNF878C9JN71 531 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 PIN1P1O15428 100 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 SRSF10O75494 262 aaKnown RBP18.96■□□□□ 0.63
SPAST-204ENST00000621856 NTF4P34130 210 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 PPP3R1P63098 170 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 TAF13Q15543 124 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 SFXN4Q6P4A7 337 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 OR10S1Q8NGN2 331 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 OR10AC1Q8NH08 325 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 TSEN15Q8WW01 171 aaKnown RBP18.96■□□□□ 0.63
SPAST-204ENST00000621856 ACOT12Q8WYK0 555 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 PPP1R14AQ96A00 147 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 ORAI1Q96D31 301 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 SCNM1Q9BWG6 230 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 SLC25A18Q9H1K4 315 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 ZNF407Q9C0G0 2248 aa18.96■□□□□ 0.63
SPAST-204ENST00000621856 TMEM269A0A1B0GVZ9 245 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 ZNF24P17028 368 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 SRMP19623 302 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 SDHBP21912 280 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 PLXDC2Q6UX71 529 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 SYT9Q86SS6 491 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 ZADH2Q8N4Q0 377 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 IL17RDQ8NFM7 739 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 TMEM45BQ96B21 275 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 ZNF416Q9BWM5 594 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 SLITRK2Q9H156 845 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 EMC3Q9P0I2 261 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 DAPK2Q9UIK4 370 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 OR52A1Q9UKL2 312 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 CAMK2AQ9UQM7 478 aa18.95■□□□□ 0.62
SPAST-204ENST00000621856 NOSIPQ9Y314 301 aaKnown RBP18.95■□□□□ 0.62
SPAST-204ENST00000621856 IGKV3D-15A0A087WSY6 115 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 A0A0G2JK05 382 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 PDCD5O14737 125 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 HSD11B1P28845 292 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 FNDC9Q8TBE3 224 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 THRSPQ92748 146 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 NABP1Q96AH0 204 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 TCF7L1Q9HCS4 588 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 BRD7Q9NPI1 651 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 SPRR3Q9UBC9 169 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 AK6Q9Y3D8 172 aaKnown RBP18.94■□□□□ 0.62
SPAST-204ENST00000621856 DNAJC13O75165 2243 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 NOTOA8MTQ0 251 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 RER1O15258 196 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 HPGDSO60760 199 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 SLC25A35Q3KQZ1 300 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 BCL2L15Q5TBC7 163 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.94■□□□□ 0.62
SPAST-204ENST00000621856 SNX29P2Q8IUI4 249 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 LRRC18Q8N456 261 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 OR51A4Q8NGJ6 313 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 KCTD12Q96CX2 325 aaKnown RBP18.94■□□□□ 0.62
SPAST-204ENST00000621856 DIRAS2Q96HU8 199 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 ALKBH3Q96Q83 286 aaPredicted RBP18.94■□□□□ 0.62
SPAST-204ENST00000621856 OCEL1Q9H607 264 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 CRLF2Q9HC73 371 aa18.94■□□□□ 0.62
SPAST-204ENST00000621856 MRPL33O75394 65 aaKnown RBP18.93■□□□□ 0.62
SPAST-204ENST00000621856 DCTDP32321 178 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms