RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 NCK1P16333 377 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 CTLA4P16410 223 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 ZFP36P26651 326 aaKnown RBP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 CFPP27918 469 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 SLC9A3P48764 834 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 SLC7A2P52569 658 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 SELENOVP59797 346 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 SEC61A1P61619 476 aaKnown RBP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 LCN2P80188 198 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 LIPEQ05469 1076 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 ST3GAL3Q11203 375 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 PSG7Q13046 419 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 ZNF718Q3SXZ3 478 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 MBNL2Q5VZF2 373 aaKnown RBP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 ACSM5Q6NUN0 579 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 C8orf82Q6P1X6 216 aaPredicted RBP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 SHQ1Q6PI26 577 aaKnown RBP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 FAM122BQ7Z309 247 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 HDDC2Q7Z4H3 204 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 FAM86B1Q8N7N1 296 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 C22orf15Q8WYQ4 148 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 FAM46AQ96IP4 442 aaKnown RBP9.67□□□□□ -0.86
CPNE3-210ENST00000621245 LRMDAQ9H2I8 198 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 DECR2Q9NUI1 292 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 IL20RAQ9UHF4 553 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 KLHL21Q9UJP4 597 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 CAPN7Q9Y6W3 813 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 VWFP04275 2813 aa9.67□□□□□ -0.86
CPNE3-210ENST00000621245 ISPDA4D126 451 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 CXCR6O00574 342 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 BPNT1O95861 308 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 SERPINA1P01009 418 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 NPPAP01160 153 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 VIMP08670 466 aaKnown RBP9.66□□□□□ -0.86
CPNE3-210ENST00000621245 DBHP09172 617 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 MSR1P21757 451 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 PCMT1P22061 227 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 GCH1P30793 250 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 GSK3BP49841 420 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 FXYD6P3P58550 94 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 TRAM2Q15035 370 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 TAF11Q15544 211 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 MAPRE2Q15555 327 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 HFEQ30201 348 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 FAM209AQ5JX71 171 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 MBOAT2Q6ZWT7 520 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 C1QL2Q7Z5L3 287 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 OAFQ86UD1 273 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 ACOT11Q8WXI4 607 aaPredicted RBP9.66□□□□□ -0.86
CPNE3-210ENST00000621245 ELMOD3Q96FG2 381 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 C4orf45Q96LM5 186 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 GAL3ST1Q99999 423 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 FNDC11Q9BVV2 318 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 KCNN2Q9H2S1 579 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 MMP26Q9NRE1 261 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 GID8Q9NWU2 228 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 UBAP1Q9NZ09 502 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 STX18Q9P2W9 335 aaKnown RBP9.66□□□□□ -0.86
CPNE3-210ENST00000621245 GPR160Q9UJ42 338 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
CPNE3-210ENST00000621245 DNAH3Q8TD57 4116 aa9.66□□□□□ -0.86
CPNE3-210ENST00000621245 TEX13CA0A0J9YWL9 993 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 DOK2O60496 412 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 DIRAS1O95057 198 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 IFNA14P01570 189 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 IGHV2-70P01814 119 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 IFNW1P05000 195 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 COX4I1P13073 169 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 HTR5AP47898 357 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 LIMS1P48059 325 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 HILS1P60008 231 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 SEC23BQ15437 767 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 IFI44LQ53G44 452 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 ZNF730Q6ZMV8 503 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 PTCHD4Q6ZW05 846 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 CBLL1Q75N03 491 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 PEG10Q86TG7 708 aaKnown RBP9.65□□□□□ -0.86
CPNE3-210ENST00000621245 ZDHHC22Q8N966 263 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 PCYOX1LQ8NBM8 494 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 SLC7A13Q8TCU3 470 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 RAB39BQ96DA2 213 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 ZNF570Q96NI8 536 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 RBP7Q96R05 134 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 SIGLEC11Q96RL6 698 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 DCLRE1CQ96SD1 692 aaKnown RBP9.65□□□□□ -0.86
CPNE3-210ENST00000621245 GPA33Q99795 319 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 C1QTNF5Q9BXJ0 243 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 PLA2G12AQ9BZM1 189 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 EIF3KQ9UBQ5 218 aaKnown RBP9.65□□□□□ -0.86
CPNE3-210ENST00000621245 STARD10Q9Y365 291 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 TIMM10BQ9Y5J6 103 aa9.65□□□□□ -0.86
CPNE3-210ENST00000621245 A0A0G2JMP0 313 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TRBV4-1A0A0J9YWV2 114 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 A0A0X1KG70 313 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 PLSCR5A0PG75 271 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 PRSS37A4D1T9 235 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 A6NIZ1 184 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 TRAPPC2LH3BP13 241 aa9.64□□□□□ -0.87
CPNE3-210ENST00000621245 DCTN6O00399 190 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms