RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PAN3Q58A45 887 aaKnown RBP11.73□□□□□ -0.53
SKP2-209ENST00000620197 ST7LQ8TDW4 575 aa11.73□□□□□ -0.53
SKP2-209ENST00000620197 NUDT9Q9BW91 350 aa11.73□□□□□ -0.53
SKP2-209ENST00000620197 PIGMQ9H3S5 423 aa11.73□□□□□ -0.53
SKP2-209ENST00000620197 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
SKP2-209ENST00000620197 FBXO4Q9UKT5 387 aa11.73□□□□□ -0.53
SKP2-209ENST00000620197 M0QYG6 137 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 RAB27BO00194 218 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 HOXB2P14652 356 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 CASRP41180 1078 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ARHGDIBP52566 201 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 EFNA3P52797 238 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ERV3-1Q14264 604 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 MICBQ29980 383 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 GLYATL3Q5SZD4 288 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 Q6ZSR6 202 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 NDUFAF7Q7L592 441 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 OOSP2Q86WS3 158 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 BEST3Q8N1M1 668 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 DMBX1Q8NFW5 382 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 OR51A2Q8NGJ7 313 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 OR8S1Q8NH09 359 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ZNF587Q96SQ5 575 aaPredicted RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 NKX6-2Q9C056 277 aaPredicted RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 CHRNA10Q9GZZ6 450 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 TO15178 435 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ATG12O94817 140 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 IGHV4-34P06331 123 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ARRB1P49407 418 aaPredicted RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 C9orf50Q5SZB4 431 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 C1QL3Q5VWW1 255 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 SLC18B1Q6NT16 456 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 WDFY1Q8IWB7 410 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ZNF721Q8TF20 911 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 VRK1Q99986 396 aaPredicted RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 CCDC3Q9BQI4 270 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 NXF5Q9H1B4 397 aaKnown RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 TXNIPQ9H3M7 391 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 MRPS33Q9Y291 106 aaKnown RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 CARHSP1Q9Y2V2 147 aaKnown RBP11.72□□□□□ -0.53
SKP2-209ENST00000620197 OR10H1Q9Y4A9 318 aa11.72□□□□□ -0.53
SKP2-209ENST00000620197 ZNF98A6NK75 572 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 PCP4L1A6NKN8 68 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 TSPAN2O60636 221 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 DDAH2O95865 285 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 CTLA4P16410 223 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 ATP1B3P54709 279 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 UNC119Q13432 240 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 MEF2DQ14814 521 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 ELOCQ15369 112 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 INPP5JQ15735 1006 aaPredicted RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 TOMM34Q15785 309 aaPredicted RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 PAPD4Q6PIY7 484 aaKnown RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 TMEM17Q86X19 198 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 OR13H1Q8NG92 308 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 OR52N5Q8NH56 324 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 TSEN15Q8WW01 171 aaKnown RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 ABHD6Q9BV23 337 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 TMEM138Q9NPI0 162 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 GDF2Q9UK05 429 aaPredicted RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 CDV3Q9UKY7 258 aaKnown RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 PLCL2Q9UPR0 1127 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 DHDHQ9UQ10 334 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 R4GMQ9 66 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 C9orf170A2RU37 121 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 PRKNO60260 465 aaPredicted RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 KLF8O95600 359 aaPredicted RBP11.71□□□□□ -0.53
SKP2-209ENST00000620197 GPM6BQ13491 265 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 SERTAD2Q14140 314 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 ACKR1Q16570 336 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 YAF2Q8IY57 180 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 ARMC10Q8N2F6 343 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 SLC30A7Q8NEW0 376 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 SLC46A1Q96NT5 459 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 CYTL1Q9NRR1 136 aa11.71□□□□□ -0.53
SKP2-209ENST00000620197 SPEGQ15772 3267 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 ZNF736B4DX44 427 aaPredicted RBP11.71□□□□□ -0.54
SKP2-209ENST00000620197 FTCDNL1E5RQL4 147 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 SCDO00767 359 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 FBXO45P0C2W1 286 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 LUMP51884 338 aaPredicted RBP11.71□□□□□ -0.54
SKP2-209ENST00000620197 ODF4Q2M2E3 257 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 SLC35D2Q76EJ3 337 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 OR4D6Q8NGJ1 314 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 NKX3-1Q99801 234 aaPredicted RBP11.71□□□□□ -0.54
SKP2-209ENST00000620197 GAREM1Q9H706 876 aa11.71□□□□□ -0.54
SKP2-209ENST00000620197 H0YIG0 161 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 ICOSLGO75144 302 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 SLC25A12O75746 678 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 TNFP01375 233 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 AMY2AP04746 511 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 CD34P28906 385 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 GSK3AP49840 483 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 MC2RQ01718 297 aa11.7□□□□□ -0.54
SKP2-209ENST00000620197 NAAAQ02083 359 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms