RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 TMEM164Q5U3C3 297 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 PTRH1Q86Y79 214 aaKnown RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 LKAAEAR1Q8TD35 194 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 C2orf50Q96LR7 162 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 AMDHD1Q96NU7 426 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 DUSP21Q9H596 190 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 POLMQ9NP87 494 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 RALGAPA1Q6GYQ0 2036 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 DUXBA0A1W2PPF3 345 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 HIST1H1CP16403 213 aaKnown RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 TNFSF4P23510 183 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CD1CP29017 333 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ACVRL1P37023 503 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CMTM4Q8IZR5 234 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 OR10A7Q8NGE5 316 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 FLVCR1Q9Y5Y0 555 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 J3KTA2 159 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ATXN1LP0C7T5 689 aaKnown RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 WASP42768 502 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 THAP3Q8WTV1 239 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 MRPS17Q9Y2R5 130 aaKnown RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 KDM4EB2RXH2 506 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 SOCS7O14512 581 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 SLC25A6P12236 298 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 EMP1P54849 157 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 SPANXN5Q5MJ07 72 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ABI3BPQ7Z7G0 1075 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF516Q92618 1163 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF443Q9Y2A4 671 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 EMC9Q9Y3B6 208 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CFHP08603 1231 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 GLCCI1Q86VQ1 547 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PLA2G12AQ9BZM1 189 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 B4DGG1 531 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 CHRM2P08172 466 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 CSNK1A1P48729 337 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 DLK1P80370 383 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 IKZF1Q13422 519 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 FAM169BQ8N8A8 192 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 SLCO3A1Q9UIG8 710 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 CACNA1IQ9P0X4 2223 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 KLRG2A4D1S0 409 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 TMEM88BA6NKF7 163 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 MBTPS2O43462 519 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PRAMEF11O60813 436 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PIPP12273 146 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 SEMA3BQ13214 749 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 TRILQ7L0X0 811 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PIGCQ92535 297 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 FAM206AQ9NX38 181 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 MYO7BQ6PIF6 2116 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 EOMESO95936 686 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 KIAA0895LQ68EN5 471 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 Q6ZPB1 254 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 LINC00518Q8N0U6 118 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PRSS3P2Q8NHM4 247 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 GPX7Q96SL4 187 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 OR2J1Q9GZK6 312 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 RNF167Q9H6Y7 350 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 NXT1Q9UKK6 140 aaKnown RBP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 EDDM13A0A1B0GTR0 161 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 OR8G3PP0DMU2 310 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 SUB1P53999 127 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 WNT7BP56706 349 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 NSUN5P2Q63ZY6 315 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 FDX2Q6P4F2 183 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PLPP7Q8NBV4 271 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 SLC26A10Q8NG04 563 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 ADAMTS18Q8TE60 1221 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 PCBD1P61457 104 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 OTUD1Q5VV17 481 aaPredicted RBP13.84□□□□□ -0.19
COL5A1-208ENST00000618395 DMRTA1Q5VZB9 504 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 SCGB1D4Q6XE38 83 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 MSL2Q9HCI7 577 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 ISLRO14498 428 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 SEMA4FO95754 770 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 ADH4P08319 380 aa13.84□□□□□ -0.19
COL5A1-208ENST00000618395 TMEM238LA0A1B0GVL6 79 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 A6NJY4 79 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 ALOX5APP20292 161 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 POLR2IP36954 125 aaKnown RBP13.83□□□□□ -0.19
COL5A1-208ENST00000618395 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 OR5M10Q6IEU7 315 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 MTMR14Q8NCE2 650 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 OR2T10Q8NGZ9 312 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 BOCQ9BWV1 1114 aa13.83□□□□□ -0.19
COL5A1-208ENST00000618395 FANCMQ8IYD8 2048 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 SGK494L7N484 410 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 TIMP2P16035 220 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 OR1Q1Q15612 314 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 CDRT4Q8N9R6 151 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 LPAR5Q9H1C0 372 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 PTPRMP28827 1452 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 RGPD5Q99666 1765 aa13.83□□□□□ -0.2
COL5A1-208ENST00000618395 NPSR1Q6W5P4 371 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms