RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ITGB8P26012 769 aa14□□□□□ -0.17
GPN1-212ENST00000616939 RABIFP47224 123 aa14□□□□□ -0.17
GPN1-212ENST00000616939 GSK3AP49840 483 aa14□□□□□ -0.17
GPN1-212ENST00000616939 RAB5BP61020 215 aa14□□□□□ -0.17
GPN1-212ENST00000616939 LCN6P62502 163 aa14□□□□□ -0.17
GPN1-212ENST00000616939 SKP1P63208 163 aa14□□□□□ -0.17
GPN1-212ENST00000616939 PDZK1IP1Q13113 114 aa14□□□□□ -0.17
GPN1-212ENST00000616939 AIMP2Q13155 320 aaKnown RBP14□□□□□ -0.17
GPN1-212ENST00000616939 SKP2Q13309 424 aa14□□□□□ -0.17
GPN1-212ENST00000616939 SWI5Q1ZZU3 235 aa14□□□□□ -0.17
GPN1-212ENST00000616939 ODF4Q2M2E3 257 aa14□□□□□ -0.17
GPN1-212ENST00000616939 FAM78AQ5JUQ0 283 aa14□□□□□ -0.17
GPN1-212ENST00000616939 CORO6Q6QEF8 472 aa14□□□□□ -0.17
GPN1-212ENST00000616939 DTWD2Q8NBA8 298 aa14□□□□□ -0.17
GPN1-212ENST00000616939 OR4C3Q8NH37 302 aa14□□□□□ -0.17
GPN1-212ENST00000616939 ELP5Q8TE02 316 aa14□□□□□ -0.17
GPN1-212ENST00000616939 OR1E3Q8WZA6 343 aa14□□□□□ -0.17
GPN1-212ENST00000616939 C8orf44Q96CB5 159 aa14□□□□□ -0.17
GPN1-212ENST00000616939 ASB16Q96NS5 453 aa14□□□□□ -0.17
GPN1-212ENST00000616939 TREM1Q9NP99 234 aa14□□□□□ -0.17
GPN1-212ENST00000616939 ZDHHC4Q9NPG8 344 aa14□□□□□ -0.17
GPN1-212ENST00000616939 RCC2Q9P258 522 aaKnown RBP14□□□□□ -0.17
GPN1-212ENST00000616939 SLC22A13Q9Y226 551 aa14□□□□□ -0.17
GPN1-212ENST00000616939 CSAG2Q9Y5P2 127 aa14□□□□□ -0.17
GPN1-212ENST00000616939 MRPS18BQ9Y676 258 aaKnown RBP14□□□□□ -0.17
GPN1-212ENST00000616939 POMT1Q9Y6A1 747 aa14□□□□□ -0.17
GPN1-212ENST00000616939 PDE4DIPQ5VU43 2346 aa14□□□□□ -0.17
GPN1-212ENST00000616939 TBC1D3DA0A087WVF3 549 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 METTL21EPA6NDL7 271 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 C2orf74A8MZ97 194 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 TBC1D3LB9A6J9 549 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 STK17BO94768 372 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 TBC1D3HP0C7X1 549 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 PGAM2P15259 253 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 MAOAP21397 527 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 GPR3P46089 330 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 PGDP52209 483 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 RIDAP52758 137 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 EIF5AP63241 154 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 NOGQ13253 232 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 PEA15Q15121 130 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 TBC1D3CQ6IPX1 549 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 UNQ6126/PRO20091Q6UXV3 157 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 FJX1Q86VR8 437 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 TBC1D3Q8IZP1 549 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 C15orf54Q8N8G6 183 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 KDF1Q8NAX2 398 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 ADAMTS18Q8TE60 1221 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 NUDCD2Q8WVJ2 157 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 DCUN1D4Q92564 292 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 SMIM8Q96KF7 97 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 ADAT1Q9BUB4 502 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 S1PR5Q9H228 398 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 SYT4Q9H2B2 425 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 LPAR3Q9UBY5 353 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 B9D1Q9UPM9 204 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 FARSAQ9Y285 508 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 SPTBP11277 2137 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 SRSF10O75494 262 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 PNPP00491 289 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 BGLAPP02818 100 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 ISG15P05161 165 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 ACAA1P09110 424 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 CAV2P51636 162 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 FUT7Q11130 342 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 ECH1Q13011 328 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 NKPD1Q17RQ9 610 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 PSRC1Q6PGN9 363 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 MISPQ8IVT2 679 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 ARHGEF39Q8N4T4 335 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 BOLLQ8N9W6 283 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 OR6S1Q8NH40 331 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 ADAMTS17Q8TE56 1095 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 FAM46BQ96A09 425 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 SLC25A44Q96H78 314 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 CMKLR1Q99788 373 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 CMSS1Q9BQ75 279 aaKnown RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 ZNF251Q9BRH9 671 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 RNF126Q9BV68 326 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 VSX1Q9NZR4 365 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 GDF2Q9UK05 429 aaPredicted RBP13.99□□□□□ -0.17
GPN1-212ENST00000616939 ANAPC10Q9UM13 185 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 HHLA2Q9UM44 414 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 TMED7Q9Y3B3 224 aa13.99□□□□□ -0.17
GPN1-212ENST00000616939 TMEM235A6NFC5 223 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 COLCA2A8K830 154 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 TGFBR3LH3BV60 316 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 EIF3GO75821 320 aaKnown RBP eCLIP13.98□□□□□ -0.17
GPN1-212ENST00000616939 LSSP48449 732 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 KCNJ3P48549 501 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 AKR1C2P52895 323 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 SRSF3P84103 164 aaKnown RBP13.98□□□□□ -0.17
GPN1-212ENST00000616939 AKR1C1Q04828 323 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 MFGE8Q08431 387 aaPredicted RBP13.98□□□□□ -0.17
GPN1-212ENST00000616939 NFATC4Q14934 902 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 MOGAT2Q3SYC2 334 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 CDNFQ49AH0 187 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 PRSS54Q6PEW0 395 aa13.98□□□□□ -0.17
GPN1-212ENST00000616939 TRAPPC6BQ86SZ2 158 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms