RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SNAPINO95295 136 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 PMP2P02689 132 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 SERPINF1P36955 418 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ACTR1BP42025 376 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ACTR1AP61163 376 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 BIKQ13323 160 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 EBPQ15125 230 aaKnown RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 PRR22Q8IZ63 422 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 OR5M8Q8NGP6 311 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 SEH1LQ96EE3 360 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 C19orf53Q9UNZ5 99 aaPredicted RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 EDDM13A0A1B0GTR0 161 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 C1QTNF3-AMACRE9PGA6 284 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 SRPX2O60687 465 aaPredicted RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 UPK3AO75631 287 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ERGP11308 486 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ACAA2P42765 397 aaKnown RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 FBXO42Q6P3S6 717 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ULK3Q6PHR2 472 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ABHD13Q7L211 337 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 MFSD9Q8NBP5 474 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ZNF563Q8TA94 476 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ZNF417Q8TAU3 575 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 WFIKKN2Q8TEU8 576 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 BADQ92934 168 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 CLCC1Q96S66 551 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 LANCL2Q9NS86 450 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 TBC1D29Q9UFV1 150 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 SLC27A6Q9Y2P4 619 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 KLF2Q9Y5W3 355 aaPredicted RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 TDRD6O60522 2096 aaKnown RBP11.9□□□□□ -0.5
MSH6-214ENST00000616033 LAMA1P25391 3075 aa11.9□□□□□ -0.51
MSH6-214ENST00000616033 NUP210Q8TEM1 1887 aaPredicted RBP11.9□□□□□ -0.51
MSH6-214ENST00000616033 BRINP1O60477 761 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 LMX1BO60663 402 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 YIF1AO95070 293 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 APBB3O95704 486 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 CTSBP07858 339 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 BTF3P20290 206 aaKnown RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 DNASE1L1P49184 302 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 HSD17B7P56937 341 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 DPTQ07507 201 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 FHL1Q13642 323 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 ZNHIT3Q15649 155 aaPredicted RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 INPP5JQ15735 1006 aaPredicted RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 UNQ6494/PRO21346Q6UXR6 183 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 LRP11Q86VZ4 500 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 PRSS35Q8N3Z0 413 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 OR4K17Q8NGC6 315 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 GAL3ST3Q96A11 431 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 AKR1E2Q96JD6 320 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 SEMA6CQ9H3T2 930 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 CENPMQ9NSP4 180 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 RP1P56715 2156 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 MEX3AA1L020 520 aaKnown RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 WRBO00258 174 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 ZNF749O43361 778 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 MOSPD3O75425 235 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 ZNF432O94892 652 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 GPR143P51810 404 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 ACTBP60709 375 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 ACTG1P63261 375 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 ZNF542PQ5EBM4 170 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 RBM18Q96H35 190 aaKnown RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 FAM117AQ9C073 453 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 UQCC1Q9NVA1 299 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 DNAJB12Q9NXW2 375 aaKnown RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 B9D1Q9UPM9 204 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 DHDHQ9UQ10 334 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 hCG_1809904A0A1W2PP81 198 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 A0A1W2PR64 198 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 A0A1W2PRV1 198 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 H7C1Q1 480 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 OR2F2O95006 317 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 SFTPBP07988 381 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 LAG3P18627 525 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 OR2F1Q13607 317 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 LCN10Q6JVE6 187 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 OR4A4PQ8NGN8 299 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 RERGQ96A58 199 aaPredicted RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 SLC41A2Q96JW4 573 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 OR51M1Q9H341 326 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 METTL8Q9H825 291 aaKnown RBP11.89□□□□□ -0.51
MSH6-214ENST00000616033 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 SPACA6W5XKT8 324 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 EML5Q05BV3 1969 aa11.89□□□□□ -0.51
MSH6-214ENST00000616033 A0A087WV62 115 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 CDC14CA4D256 554 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 OR4C45A6NMZ5 311 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 SULT2B1O00204 365 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 MED6O75586 246 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 CD2P06729 351 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 HEXBP07686 556 aa11.88□□□□□ -0.51
MSH6-214ENST00000616033 RAB6AP20340 208 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms