RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ZNF525Q8N782 197 aa14.38□□□□□ -0.11
CBWD3-211ENST00000615061 OR1J2Q8NGS2 313 aa14.38□□□□□ -0.11
CBWD3-211ENST00000615061 SLC7A6Q92536 515 aa14.38□□□□□ -0.11
CBWD3-211ENST00000615061 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
CBWD3-211ENST00000615061 SNX18Q96RF0 628 aa14.38□□□□□ -0.11
CBWD3-211ENST00000615061 H3BN98 237 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 CLPTM1O96005 669 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 TFP02787 698 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 LCKP06239 509 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 PYCR1P32322 319 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 GDI2P50395 445 aaKnown RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 LSM6P62312 80 aaKnown RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 AQP6Q13520 282 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 CORO6Q6QEF8 472 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 LYPD4Q6UWN0 246 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 SLC37A3Q8NCC5 494 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 MAPK1IP1LQ8NDC0 245 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 OR2T33Q8NG76 320 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 OR51L1Q8NGJ5 315 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 OR9Q1Q8NGQ5 310 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 BARX1Q9HBU1 254 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 DUSP13Q9UII6 198 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 FKBP7Q9Y680 259 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 SVEP1Q4LDE5 3571 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 VSTM5A8MXK1 200 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 RER1O15258 196 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 SGCEO43556 437 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 DOK2O60496 412 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 GYPBP06028 91 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 POU1F1P28069 291 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 ALDH3B1P43353 468 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 RPS23P62266 143 aaKnown RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 SCRN3Q0VDG4 424 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 COX10Q12887 443 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 CRMP1Q14194 572 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 MAD2L1BPQ15013 274 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 KCNMB1Q16558 191 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 SPATA46Q5T0L3 261 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 RGS7BPQ6MZT1 257 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 VASH1Q7L8A9 365 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-211ENST00000615061 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 COX4I2Q96KJ9 171 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 PLEK2Q9NYT0 353 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 POLR1DQ9Y2S0 133 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 LHFPL6Q9Y693 200 aa14.37□□□□□ -0.11
CBWD3-211ENST00000615061 ANK3Q12955 4377 aaKnown RBP14.36□□□□□ -0.11
CBWD3-211ENST00000615061 DEAF1O75398 565 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-211ENST00000615061 NGFP01138 241 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 ADRA2AP08913 450 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 INHBBP09529 407 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 PCSK6P29122 969 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 HTR5AP47898 357 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 PPOXP50336 477 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 EFNA4P52798 201 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 GLO1Q04760 184 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 ALKBH6Q3KRA9 238 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 CCDC92Q53HC0 331 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-211ENST00000615061 RFPL4BQ6ZWI9 263 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 LINC00346Q8IVM7 164 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 OR1J1Q8NGS3 322 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 TEX47Q8TBZ9 253 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 BDH2Q9BUT1 245 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 RBM4Q9BWF3 364 aaKnown RBP14.36□□□□□ -0.11
CBWD3-211ENST00000615061 TPK1Q9H3S4 243 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 MRPL22Q9NWU5 206 aaKnown RBP14.36□□□□□ -0.11
CBWD3-211ENST00000615061 HIVEP2P31629 2446 aa14.36□□□□□ -0.11
CBWD3-211ENST00000615061 FN1P02751 2386 aaKnown RBP14.36□□□□□ -0.11
CBWD3-211ENST00000615061 YLPM1P49750 1951 aaKnown RBP14.35□□□□□ -0.11
CBWD3-211ENST00000615061 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 RNF223E7ERA6 249 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 F12P00748 615 aaPredicted RBP14.35□□□□□ -0.11
CBWD3-211ENST00000615061 HLA-DQA2P01906 255 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 CLUP10909 449 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 RPS27P42677 84 aaKnown RBP14.35□□□□□ -0.11
CBWD3-211ENST00000615061 RAD52P43351 418 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 TEKQ02763 1124 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 TMEM255AQ5JRV8 349 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 ACSM5Q6NUN0 579 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 SHQ1Q6PI26 577 aaKnown RBP14.35□□□□□ -0.11
CBWD3-211ENST00000615061 AMIGO2Q86SJ2 522 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 ATG16L2Q8NAA4 619 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 PROKR2Q8NFJ6 384 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 BCL2L14Q9BZR8 327 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 AP4S1Q9Y587 144 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 NAV3Q8IVL0 2385 aa14.35□□□□□ -0.11
CBWD3-211ENST00000615061 TVP23AA6NH52 213 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 EBAG9O00559 213 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 SYNGR3O43761 229 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 CIB2O75838 187 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 DBHP09172 617 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 FOSL1P15407 271 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 ATP6AP1Q15904 470 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 ABHD4Q8TB40 342 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 LRTOMTQ8WZ04 291 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 DUS3LQ96G46 650 aaKnown RBP14.34□□□□□ -0.11
CBWD3-211ENST00000615061 WACQ9BTA9 647 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 HCAR1Q9BXC0 346 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 MED20Q9H944 212 aa14.34□□□□□ -0.11
CBWD3-211ENST00000615061 ZNF556Q9HAH1 456 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms