RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ADRA2CP18825 462 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 CD34P28906 385 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 NAA10P41227 235 aaPredicted RBP19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 SNRPEP62304 92 aaKnown RBP19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 SMCO1Q147U7 214 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 ABHD17CQ6PCB6 329 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 INO80EQ8NBZ0 244 aaPredicted RBP19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 PMM1Q92871 262 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 CDC6Q99741 560 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 ZNF559Q9BR84 538 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 ADAT1Q9BUB4 502 aaKnown RBP19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 ZNF350Q9GZX5 532 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 MEPEQ9NQ76 525 aaPredicted RBP19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 SMCO4Q9NRQ5 59 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 SLC22A11Q9NSA0 550 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 PLEKHA6Q9Y2H5 1048 aa19.77■□□□□ 0.76
POLR2J3-220ENST00000613744 CTAG2O75638 210 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 C8orf89P0DMQ9 161 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 TMIGD3P0DMS9 266 aaPredicted RBP19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 BCL6P41182 706 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF684Q5T5D7 378 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 DRAM2Q6UX65 266 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF574Q6ZN55 896 aaPredicted RBP19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 SLC16A13Q7RTY0 426 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 TMPRSS12Q86WS5 348 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 GABRG1Q8N1C3 465 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 SLC16A11Q8NCK7 471 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF417Q8TAU3 575 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 GPX8Q8TED1 209 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 THRSPQ92748 146 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 MS4A6EQ96DS6 147 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 MACROD1Q9BQ69 325 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 PRDM9Q9NQV7 894 aa19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 METTL1Q9UBP6 276 aaKnown RBP19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF230Q9UIE0 474 aaPredicted RBP19.77■□□□□ 0.75
POLR2J3-220ENST00000613744 PCNX2A6NKB5 2137 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 SPAARA0A1B0GVQ0 90 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 ANXA2P07355 339 aaKnown RBP19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 PJVKQ0ZLH3 352 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 TAF13Q15543 124 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 TMEM205Q6UW68 189 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 TNFRSF13CQ96RJ3 184 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 SDF2Q99470 211 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 SLCO5A1Q9H2Y9 848 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 TMEM27Q9HBJ8 222 aa19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 CDV3Q9UKY7 258 aaKnown RBP19.76■□□□□ 0.75
POLR2J3-220ENST00000613744 HTR3BO95264 441 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 WNT11O96014 354 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 CD3DP04234 171 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 ST6GAL1P15907 406 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 NANOS3P60323 173 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF425Q6IV72 752 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 FIGLAQ6QHK4 219 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 SAMD14Q8IZD0 417 aaPredicted RBP19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 RCBTB1Q8NDN9 531 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 OR2L5Q8NG80 312 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 OR4K14Q8NGD5 310 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 OR5AP2Q8NGF4 316 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 PIK3IP1Q96FE7 263 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 ZDHHC12Q96GR4 267 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 TWSG1Q9GZX9 223 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 SEMA6CQ9H3T2 930 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 IGHV5-51A0A0C4DH38 117 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 A0A0J9YY10 115 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 P2RX6O15547 441 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 ERI3O43414 337 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 FADS1O60427 444 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 AK1P00568 194 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 IGHV2-70P01814 119 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 ISXQ2M1V0 245 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 MRPL2Q5T653 305 aaKnown RBP19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 FCRL6Q6DN72 434 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 CORO6Q6QEF8 472 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 PLXDC1Q8IUK5 500 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 ZFP82Q8N141 532 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 KLHL31Q9H511 634 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 SYNPO2LQ9H987 977 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 TREM1Q9NP99 234 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 HEATR5BQ9P2D3 2071 aa19.75■□□□□ 0.75
POLR2J3-220ENST00000613744 TRBV5-7A0A0A0MS05 114 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 CDC40O60508 579 aaKnown RBP eCLIP19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 NDUFB2O95178 105 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 FHL1Q13642 323 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 ALKBH1Q13686 389 aaKnown RBP19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 OR5AK2Q8NH90 309 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF426Q9BUY5 554 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 WDFY3Q8IZQ1 3526 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 OR6C76A6NM76 312 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 RAB3DO95716 219 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 CD74P04233 296 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 HIST1H1CP16403 213 aaKnown RBP19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 PMELP40967 661 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 AKR1C2P52895 323 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 AKR1C1Q04828 323 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 EIF2S3LQ2VIR3 472 aaKnown RBP19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 WDR74Q6RFH5 385 aaPredicted RBP19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 FAM220AQ7Z4H9 259 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF595Q8IYB9 648 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 ZNF561Q8N587 486 aa19.74■□□□□ 0.75
POLR2J3-220ENST00000613744 BOLLQ8N9W6 283 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms