RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 GK3PQ14409 553 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 MAD2L1BPQ15013 274 aaPredicted RBP11.5□□□□□ -0.57
SENP3-209ENST00000610454 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 ALKBH6Q3KRA9 238 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 ZNF718Q3SXZ3 478 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 UGT2A3Q6UWM9 527 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
SENP3-209ENST00000610454 LRP11Q86VZ4 500 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 SPATA24Q86W54 205 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 SDR9C7Q8NEX9 313 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 OR52E2Q8NGJ4 325 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 UBASH3BQ8TF42 649 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 SNX18Q96RF0 628 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 NMNAT3Q96T66 252 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 CHID1Q9BWS9 393 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 SRA1Q9HD15 236 aaKnown RBP11.5□□□□□ -0.57
SENP3-209ENST00000610454 RPRD1BQ9NQG5 326 aaKnown RBP11.5□□□□□ -0.57
SENP3-209ENST00000610454 ASH2LQ9UBL3 628 aa11.5□□□□□ -0.57
SENP3-209ENST00000610454 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
SENP3-209ENST00000610454 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 ACOT8O14734 319 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 TPD52L2O43399 206 aaKnown RBP11.49□□□□□ -0.57
SENP3-209ENST00000610454 TLX2O43763 284 aaPredicted RBP11.49□□□□□ -0.57
SENP3-209ENST00000610454 E2F6O75461 281 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 GASTP01350 101 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 NAT2P11245 290 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 ZNF250P15622 560 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 NR4A2P43354 598 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.49□□□□□ -0.57
SENP3-209ENST00000610454 PPP1R8Q12972 351 aaKnown RBP11.49□□□□□ -0.57
SENP3-209ENST00000610454 MICAQ29983 383 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 SLC36A3Q495N2 470 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 SPATA46Q5T0L3 261 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 SLC35F1Q5T1Q4 408 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 RASSF6Q6ZTQ3 369 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 OR4C15Q8NGM1 316 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 C4orf45Q96LM5 186 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 TSSK2Q96PF2 358 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 RACGAP1Q9H0H5 632 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 HINT3Q9NQE9 182 aaKnown RBP11.49□□□□□ -0.57
SENP3-209ENST00000610454 MYEF2Q9P2K5 600 aaKnown RBP11.49□□□□□ -0.57
SENP3-209ENST00000610454 RTTNQ86VV8 2226 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 ABCA1O95477 2261 aa11.49□□□□□ -0.57
SENP3-209ENST00000610454 IGLV3-9A0A075B6K5 115 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 INAFM1C9JVW0 142 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 H3BSA7 217 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 CD5LO43866 347 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 MPZL1O95297 269 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 CLPTM1O96005 669 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 SCG5P05408 212 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 WNT5AP41221 380 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 PPP1CBP62140 327 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 PCGF3Q3KNV8 242 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 ZMAT1Q5H9K5 638 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
SENP3-209ENST00000610454 ZNF101Q8IZC7 436 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 ADGRG5Q8IZF4 528 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 ZNF786Q8N393 782 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 NPEPL1Q8NDH3 523 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 GJC3Q8NFK1 279 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 OR10G2Q8NGC3 310 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 OR2AJ1Q8NGZ0 328 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 SLC25A40Q8TBP6 338 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 GIPC3Q8TF64 312 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 CANT1Q8WVQ1 401 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 COG8Q96MW5 612 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 TSSK6Q9BXA6 273 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 BPESC1Q9GZL8 116 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 YAE1D1Q9NRH1 226 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 IL20Q9NYY1 176 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 B9D1Q9UPM9 204 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 BAIAP2Q9UQB8 552 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 GRIP1Q9Y3R0 1128 aa11.48□□□□□ -0.57
SENP3-209ENST00000610454 IGLV1-36A0A0B4J1U3 117 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 C17orf100A8MU93 164 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 ATP5HO75947 161 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 SOX14O95416 240 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 IFNGP01579 166 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 ZNF823P16415 610 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 KCNMB1Q16558 191 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 OTPQ5XKR4 325 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 ZNF770Q6IQ21 691 aaPredicted RBP11.47□□□□□ -0.57
SENP3-209ENST00000610454 RFPL4BQ6ZWI9 263 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 OR6V1Q8N148 313 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 PROKR2Q8NFJ6 384 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 OR2T33Q8NG76 320 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 OR2T4Q8NH00 348 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 OR1F12Q8NHA8 337 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 TEX47Q8TBZ9 253 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 KLF14Q8TD94 323 aaPredicted RBP11.47□□□□□ -0.57
SENP3-209ENST00000610454 RDH5Q92781 318 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 SLC7A6OSQ96CW6 309 aaPredicted RBP11.47□□□□□ -0.57
SENP3-209ENST00000610454 POM121Q96HA1 1249 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 DGCR6LQ9BY27 220 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 OR2J1Q9GZK6 312 aa11.47□□□□□ -0.57
SENP3-209ENST00000610454 HDHD2Q9H0R4 259 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms