RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 THOC7Q6I9Y2 204 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 C1orf94Q6P1W5 598 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 TMEM107Q6UX40 140 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ACP7Q6ZNF0 438 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 SSX9Q7RTT3 188 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 AKAP14Q86UN6 197 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CYP4Z1Q86W10 505 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 TGIF2LXQ8IUE1 241 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 RBM45Q8IUH3 476 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CYB561A3Q8NBI2 242 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 OR2L3Q8NG85 312 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 FAM110BQ8TC76 370 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 PYROXD1Q8WU10 500 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ING5Q8WYH8 240 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 NDRG1Q92597 394 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 SLC38A4Q969I6 547 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF799Q96GE5 643 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CPB2Q96IY4 423 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 SH3GL3Q99963 347 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 TMEM246Q9BRR3 403 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 PELOQ9BRX2 385 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 PRRG3Q9BZD7 231 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 GBA3Q9H227 469 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 OR51V1Q9H2C8 321 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 PPA2Q9H2U2 334 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 METTL8Q9H825 291 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 NMRAL1Q9HBL8 299 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 CACNG2Q9Y698 323 aa2.84□□□□□ -1.95
SMCHD1-213ENST00000609587 FANCIQ9NVI1 1328 aa2.84□□□□□ -1.96
SMCHD1-213ENST00000609587 PPIAL4EA0A075B759 164 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 A0A0G2JN53 185 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 MGAT4DA6NG13 374 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 OR6C70A6NIJ9 312 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 C12orf77C9JDV5 145 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 MKRN2OSH3BPM6 223 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 BCKDKO14874 412 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 SCAMP2O15127 329 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 RAD51BO15315 384 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ERCC1P07992 297 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 UBTFL1P0CB47 393 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC35E2BP0CK96 405 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 PPIAL4FP0DN26 164 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 CSNK1DP48730 415 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ATP5J2P56134 94 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 UBE2G2P60604 165 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ERVK-25P63136 954 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ADARB1P78563 741 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 CDC20Q12834 499 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 PMS2P3Q13401 168 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 GNMTQ14749 295 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 GPNMBQ14956 572 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 CYTH1Q15438 398 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 RNASEKQ6P5S7 137 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 IGFL2Q6UWQ7 119 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 PAGE2Q7Z2X7 111 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 FAM122BQ7Z309 247 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ITPRIPQ8IWB1 547 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 TMEM61Q8N0U2 210 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 PROKR2Q8NFJ6 384 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 OR5T1Q8NG75 326 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 OR7G2Q8NG99 324 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 OR51L1Q8NGJ5 315 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ACOT11Q8WXI4 607 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 RAD51AP1Q96B01 352 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 CCDC127Q96BQ5 260 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ECHDC3Q96DC8 303 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 OTUB2Q96DC9 234 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 FMO2Q99518 471 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 TEKT3Q9BXF9 490 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 TM6SF2Q9BZW4 377 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 GOLPH3Q9H4A6 298 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 NIPAL2Q9H841 368 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 CD209Q9NNX6 404 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 C20orf96Q9NUD7 363 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 IMP3Q9NV31 184 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC17A7Q9P2U7 560 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 PSMC3IPQ9P2W1 217 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 NUFIP1Q9UHK0 495 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 MMP17Q9ULZ9 603 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 PSMD13Q9UNM6 376 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 SAMHD1Q9Y3Z3 626 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC25A15Q9Y619 301 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 NPTNQ9Y639 398 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 MN1Q10571 1320 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 ANKRD30AQ9BXX3 1397 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 SMARCA2P51531 1590 aa2.83□□□□□ -1.96
SMCHD1-213ENST00000609587 A6NDX4 124 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 RNASEK-C17orf49H0YIS7 233 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 KLRC4-KLRK1H3BQV0 150 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 DLGAP1O14490 977 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 CA11O75493 328 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 RPP14O95059 124 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 H6PDO95479 791 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 MOSP00540 346 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 CRISP2P16562 243 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 RCC1P18754 421 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 IL12BP29460 328 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 CD40LGP29965 261 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 BTCP35070 178 aa2.82□□□□□ -1.96
SMCHD1-213ENST00000609587 GYG1P46976 350 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms