RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SLC25A44Q96H78 314 aaPredicted RBP20.11■□□□□ 0.81
SHANK2-220ENST00000608988 CNTNAP3BQ96NU0 1288 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 MMP26Q9NRE1 261 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 MKL2Q9ULH7 1088 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 HHLA2Q9UM44 414 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 FARSAQ9Y285 508 aaKnown RBP20.11■□□□□ 0.81
SHANK2-220ENST00000608988 TRAV36DV7A0A075B6V5 113 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 CPED1A4D0V7 1026 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 PRSS37A4D1T9 235 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 DUS4LO95620 317 aaKnown RBP20.11■□□□□ 0.81
SHANK2-220ENST00000608988 ISG15P05161 165 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 PSMB6P28072 239 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 KIR2DL1P43626 348 aaPredicted RBP20.11■□□□□ 0.81
SHANK2-220ENST00000608988 DNASE1L1P49184 302 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 CX3CR1P49238 355 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 GSK3AP49840 483 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 CCR4P51679 360 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 CXADRP78310 365 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 NNATQ16517 81 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 PRTGQ2VWP7 1150 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 DRAM2Q6UX65 266 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 SEC11CQ9BY50 192 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 NMES1Q9C002 83 aa20.11■□□□□ 0.81
SHANK2-220ENST00000608988 MRPS18BQ9Y676 258 aaKnown RBP20.11■□□□□ 0.81
SHANK2-220ENST00000608988 OR5K4A6NMS3 321 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 SIGLEC5O15389 551 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 ZNF208O43345 1280 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 OIP5O43482 229 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 PNPP00491 289 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 HLA-DQA2P01906 255 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 RPL27P61353 136 aaKnown RBP20.1■□□□□ 0.81
SHANK2-220ENST00000608988 IL13RA1P78552 427 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 SIGLEC14Q08ET2 396 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 ZNF260Q3ZCT1 412 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 MAMDC2Q7Z304 686 aaPredicted RBP20.1■□□□□ 0.81
SHANK2-220ENST00000608988 SKA3Q8IX90 412 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 DTWD2Q8NBA8 298 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 OR4K17Q8NGC6 315 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 LILRB1Q8NHL6 650 aaPredicted RBP20.1■□□□□ 0.81
SHANK2-220ENST00000608988 ZNF519Q8TB69 540 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 FAM174AQ8TBP5 190 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 SEC22AQ96IW7 307 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 CMKLR1Q99788 373 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 GABRG3Q99928 467 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 CST11Q9H112 138 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 STARD5Q9NSY2 213 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 COA4Q9NYJ1 87 aa20.1■□□□□ 0.81
SHANK2-220ENST00000608988 CCSO14618 274 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 CRHP06850 196 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 DCNP07585 359 aaKnown RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 HSD17B7P56937 341 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 STK11Q15831 433 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 CDNFQ49AH0 187 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 LRRC37A5PQ49AS3 106 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 AWAT2Q6E213 333 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 ZNF704Q6ZNC4 412 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 MED25Q71SY5 747 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 BAP18Q8IXM2 172 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 FRMD1Q8N878 549 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 ZNF563Q8TA94 476 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 METTL21AQ8WXB1 218 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 KXD1Q9BQD3 176 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 PTDSS2Q9BVG9 487 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 R4GMQ9 66 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 IGLV1-36A0A0B4J1U3 117 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 KIR2DS5A0A0G2JLQ3 304 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 A0A0G2JNG1 304 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 DBX1A6NMT0 343 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 F8W036 122 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 KIR2DS3K7RE56 304 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 IGHMP01871 453 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 NTSR1P30989 418 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 GDI1P31150 447 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 RPS27P42677 84 aaKnown RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 NR0B1P51843 470 aaKnown RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 ARHGDIBP52566 201 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 YPEL5P62699 121 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 BLOC1S1P78537 153 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 MFGE8Q08431 387 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 KIR2DS5Q14953 304 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 NKAPLQ5M9Q1 402 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 LYPD6Q86Y78 171 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 GATSQ8NAP1 163 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 DMBX1Q8NFW5 382 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 FAM46BQ96A09 425 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 ZFP57Q9NU63 452 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 GDF2Q9UK05 429 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-220ENST00000608988 GTF2A1LQ9UNN4 478 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 CLDN16Q9Y5I7 305 aa20.09■□□□□ 0.81
SHANK2-220ENST00000608988 H3BSH0 61 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 STK17BO94768 372 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 UTS2O95399 124 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 SPARCP09486 303 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 ADCYAP1P18509 176 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 ATXN7L3Q14CW9 347 aaPredicted RBP20.08■□□□□ 0.81
SHANK2-220ENST00000608988 SGCBQ16585 318 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 GUCA2BQ16661 112 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 ZNF528Q3MIS6 628 aa20.08■□□□□ 0.81
SHANK2-220ENST00000608988 BEX5Q5H9J7 111 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms