RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ZNF296Q8WUU4 475 aaPredicted RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 ALG12Q9BV10 488 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 CACNA1HO95180 2353 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 PRLHRP49683 370 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 MTCP1P56278 107 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 PCBD1P61457 104 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 IKZF1Q13422 519 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ERV3-1Q14264 604 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 MSMO1Q15800 293 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF66Q6ZN08 573 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 TMEFF1Q8IYR6 380 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 SGPP1Q9BX95 441 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 PCDHGA9Q9Y5G4 932 aaKnown RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 IGKV6-21A0A0C4DH24 114 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ZC3H12DA2A288 527 aaKnown RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 TUSC2O75896 110 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 RBP2P50120 134 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ZP2Q05996 745 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 PMPCAQ10713 525 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 HNRNPA1L2Q32P51 320 aaKnown RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 COX20Q5RI15 118 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 RNASEKQ6P5S7 137 aaKnown RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 OR51A4Q8NGJ6 313 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF566Q969W8 418 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 H3BQ06 376 aaPredicted RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 CA3P07451 260 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM184AQ6ZMB5 413 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 GCNT2Q8N0V5 402 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 PGAP3Q96FM1 320 aaPredicted RBP8□□□□□ -1.13
CSMD1-216ENST00000602557 APOOQ9BUR5 198 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 TAS2R5Q9NYW4 299 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 CAMK2DQ13557 499 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8□□□□□ -1.13
CSMD1-216ENST00000602557 Q6ZTK2 550 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF687Q8N1G0 1237 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 SLC43A2Q8N370 569 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 OR8B4Q96RC9 309 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 SELENOIQ9C0D9 397 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 UCK1Q9HA47 277 aa8□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF593O00488 134 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 HSD17B6O14756 317 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 CBARPQ8N350 705 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 FAM24BQ8N5W8 94 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 OR14A16Q8NHC5 309 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 FAM3DQ96BQ1 224 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 MSI2Q96DH6 328 aaKnown RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ARFGEF1Q9Y6D6 1849 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 AQP7P3A6NL99 342 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 PXNP49023 591 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 LSMEM2Q8N112 164 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF775Q96BV0 537 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 HRASLS5Q96KN8 279 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 SIRT7Q9NRC8 400 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 KLHL42Q9P2K6 505 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 PRAMEF26H0Y7S4 382 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ATP1B3P54709 279 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 SIRPAP78324 504 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM244Q5VVB8 128 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ARFGAP1Q8N6T3 406 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 TEX37Q96LM6 180 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 NKX2-4Q9H2Z4 354 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 CGGBP1Q9UFW8 167 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 NXT1Q9UKK6 140 aaKnown RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 NRAPQ86VF7 1730 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 RAB27BO00194 218 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 SLC2A1P11166 492 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF787Q6DD87 383 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 MOB3CQ70IA8 216 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 PLPP7Q8NBV4 271 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 CLEC1AQ8NC01 280 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 OR51A2Q8NGJ7 313 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 OR5M1Q8NGP8 315 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 PACRGQ96M98 296 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 GNG12Q9UBI6 72 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 TUBGCP6Q96RT7 1819 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 FAM155AB1AL88 458 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 SOX15O60248 233 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 DAOP14920 347 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 SRMP19623 302 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ARHGDIGQ99819 225 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ANKRD19PQ9H560 264 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 COL6A6A6NMZ7 2263 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 H0YGG7 62 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 IL2RGP31785 369 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 OR5I1Q13606 314 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF429Q86V71 674 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ISG20Q96AZ6 181 aaKnown RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ESRP2Q9H6T0 727 aaKnown RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 MMP26Q9NRE1 261 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 RNF186Q9NXI6 227 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 BET1LQ9NYM9 111 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 EMC9Q9Y3B6 208 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ENTPD2Q9Y5L3 495 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 CBR3O75828 277 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 GLI4P10075 376 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ACKR3P25106 362 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 HLXQ14774 488 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 CDKN3Q16667 212 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM59Q9BXS4 323 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms