RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 NDRG4Q9ULP0 352 aaKnown RBP11.12□□□□□ -0.63
RPS28-204ENST00000602140 FFAR1O14842 300 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 FOXH1O75593 365 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 FSHBP01225 129 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 IGHV2-70P01814 119 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 IFNW1P05000 195 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 COX5BP10606 129 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 EGR1P18146 543 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 GSTM3P21266 225 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 FPR2P25090 351 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 RPL4P36578 427 aaKnown RBP11.11□□□□□ -0.63
RPS28-204ENST00000602140 GPR4P46093 362 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 HTR5AP47898 357 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 SLC9A3P48764 834 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 ANKDD1AQ495B1 522 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 TBPL2Q6SJ96 375 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 ZNF730Q6ZMV8 503 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 RNF113BQ8IZP6 322 aaKnown RBP11.11□□□□□ -0.63
RPS28-204ENST00000602140 OR2Z1Q8NG97 314 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 ACOT11Q8WXI4 607 aaPredicted RBP11.11□□□□□ -0.63
RPS28-204ENST00000602140 TMEM106BQ9NUM4 274 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 TBCCD1Q9NVR7 557 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 GMPR2Q9P2T1 348 aaKnown RBP11.11□□□□□ -0.63
RPS28-204ENST00000602140 GRHPRQ9UBQ7 328 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 EGFL7Q9UHF1 273 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 PURGQ9UJV8 347 aaKnown RBP11.11□□□□□ -0.63
RPS28-204ENST00000602140 ADAM18Q9Y3Q7 739 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 DYSFO75923 2080 aa11.11□□□□□ -0.63
RPS28-204ENST00000602140 TANC2Q9HCD6 1990 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 PPIAL4EA0A075B759 164 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 A0A087WUU8 490 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 PPIAL4CA0A0B4J2A2 164 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 PPIAL4DF5H284 164 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 XKRYO14609 159 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 CDC42EP2O14613 210 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 SGCEO43556 437 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 DOK2O60496 412 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 ZNF682O95780 498 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 CD14P08571 375 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 PPIAL4FP0DN26 164 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 TNFSF4P23510 183 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
RPS28-204ENST00000602140 SCRN3Q0VDG4 424 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 AWAT1Q58HT5 328 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 MESTQ5EB52 335 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 OTPQ5XKR4 325 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 Q6ZR03 302 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 MBOAT2Q6ZWT7 520 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 KLHL36Q8N4N3 616 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 NPEPL1Q8NDH3 523 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 DEFB108BQ8NET1 73 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 DVL3Q92997 716 aaPredicted RBP11.1□□□□□ -0.63
RPS28-204ENST00000602140 RCN3Q96D15 328 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 CMBLQ96DG6 245 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 SAMD8Q96LT4 415 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 Q96M85 177 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 WACQ9BTA9 647 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 NTN4Q9HB63 628 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 MMP26Q9NRE1 261 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 DDX28Q9NUL7 540 aaKnown RBP11.1□□□□□ -0.63
RPS28-204ENST00000602140 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 STARD10Q9Y365 291 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 PPIAL4AQ9Y536 164 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 CAPN7Q9Y6W3 813 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 ARHGAP32A7KAX9 2087 aa11.1□□□□□ -0.63
RPS28-204ENST00000602140 WNK2Q9Y3S1 2297 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 PRSS37A4D1T9 235 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 ZNF26P17031 533 aaPredicted RBP11.09□□□□□ -0.63
RPS28-204ENST00000602140 TNFRSF1AP19438 455 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 KITLGP21583 273 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 TUBG1P23258 451 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 SEC61A1P61619 476 aaKnown RBP11.09□□□□□ -0.63
RPS28-204ENST00000602140 ZBED5Q49AG3 693 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 IFI44LQ53G44 452 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 C1orf94Q6P1W5 598 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 TMPRSS11FQ6ZWK6 438 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 FKBP9P1Q75LS8 142 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 VASH1Q7L8A9 365 aaPredicted RBP11.09□□□□□ -0.63
RPS28-204ENST00000602140 RRM2BQ7LG56 351 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
RPS28-204ENST00000602140 SLC15A3Q8IY34 581 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 SPICQ8N5J4 248 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 POU5F2Q8N7G0 328 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 ZNF283Q8N7M2 679 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 FAM156AQ8NDB6 213 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 ITLN1Q8WWA0 313 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 SLC7A6Q92536 515 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 HAVCR1Q96D42 359 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 ZNF570Q96NI8 536 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 RERGLQ9H628 205 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 PATZ1Q9HBE1 687 aaKnown RBP11.09□□□□□ -0.63
RPS28-204ENST00000602140 TUBG2Q9NRH3 451 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 ARGLU1Q9NWB6 273 aaPredicted RBP11.09□□□□□ -0.63
RPS28-204ENST00000602140 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 ARMCX1Q9P291 453 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 AP3M1Q9Y2T2 418 aa11.09□□□□□ -0.63
RPS28-204ENST00000602140 TEX13CA0A0J9YWL9 993 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms