RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 USH1CQ9Y6N9 552 aa14.03□□□□□ -0.16
USE1-208ENST00000600970 TIMM23O14925 209 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 ERLIN1O75477 346 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 NDUFA7O95182 113 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 ABHD16AO95870 558 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 TSPAN19P0C672 248 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 CD247P20963 164 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 GSTM3P21266 225 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 KITLGP21583 273 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 MMP16P51512 607 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 GNB2P62879 340 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 RUNDC3AQ59EK9 446 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 ARL9Q6T311 187 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 DLEU7Q6UYE1 221 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 KLBQ86Z14 1044 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 MARCH7Q9H992 704 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 TMEM165Q9HC07 324 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 GCM1Q9NP62 436 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 ZNF281Q9Y2X9 895 aa14.02□□□□□ -0.17
USE1-208ENST00000600970 CLPSL1A2RUU4 121 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 GMNCA6NCL1 334 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 NPIPB13A6NJU9 1138 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 NPIPB4C9JG80 1138 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 SURF4O15260 269 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 ZNF205O95201 554 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 THRBP10828 461 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 RPS2P15880 293 aaKnown RBP14.01□□□□□ -0.17
USE1-208ENST00000600970 CPT2P23786 658 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 PCBD1P61457 104 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 ENDOGQ14249 297 aaKnown RBP14.01□□□□□ -0.17
USE1-208ENST00000600970 LAPTM4AQ15012 233 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 ASPHD2Q6ICH7 369 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 Q6YL49 198 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 FOXL2NBQ6ZUU3 175 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 NKAIN4Q8IVV8 208 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 CLDN22Q8N7P3 220 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 NPEPL1Q8NDH3 523 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 ZNF420Q8TAQ5 688 aaPredicted RBP14.01□□□□□ -0.17
USE1-208ENST00000600970 CMBLQ96DG6 245 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 SGTBQ96EQ0 304 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 RBM4BQ9BQ04 359 aaKnown RBP14.01□□□□□ -0.17
USE1-208ENST00000600970 CHIAQ9BZP6 476 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 TXNIPQ9H3M7 391 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 C20orf141Q9NUB4 165 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 TBCCD1Q9NVR7 557 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 MIOXQ9UGB7 285 aa14.01□□□□□ -0.17
USE1-208ENST00000600970 KIR2DS1A0A191URI9 304 aa14□□□□□ -0.17
USE1-208ENST00000600970 CYB5R3P00387 301 aaPredicted RBP14□□□□□ -0.17
USE1-208ENST00000600970 NR2C1P13056 603 aa14□□□□□ -0.17
USE1-208ENST00000600970 SELEP16581 610 aa14□□□□□ -0.17
USE1-208ENST00000600970 TUBG1P23258 451 aa14□□□□□ -0.17
USE1-208ENST00000600970 CYP51A1Q16850 503 aa14□□□□□ -0.17
USE1-208ENST00000600970 FAM205BPQ63HN1 556 aa14□□□□□ -0.17
USE1-208ENST00000600970 HIST2H2BDQ6DRA6 164 aa14□□□□□ -0.17
USE1-208ENST00000600970 C1QL4Q86Z23 238 aa14□□□□□ -0.17
USE1-208ENST00000600970 TMEM255BQ8WV15 326 aa14□□□□□ -0.17
USE1-208ENST00000600970 LIPHQ8WWY8 451 aa14□□□□□ -0.17
USE1-208ENST00000600970 UBE2FQ969M7 185 aa14□□□□□ -0.17
USE1-208ENST00000600970 TAMM41Q96BW9 452 aa14□□□□□ -0.17
USE1-208ENST00000600970 HAVCR1Q96D42 359 aa14□□□□□ -0.17
USE1-208ENST00000600970 NEIL1Q96FI4 390 aaPredicted RBP14□□□□□ -0.17
USE1-208ENST00000600970 PLEKHA8Q96JA3 519 aa14□□□□□ -0.17
USE1-208ENST00000600970 RBP7Q96R05 134 aa14□□□□□ -0.17
USE1-208ENST00000600970 ALG12Q9BV10 488 aa14□□□□□ -0.17
USE1-208ENST00000600970 NOX4Q9NPH5 578 aa14□□□□□ -0.17
USE1-208ENST00000600970 TUBG2Q9NRH3 451 aa14□□□□□ -0.17
USE1-208ENST00000600970 NDRG4Q9ULP0 352 aaKnown RBP14□□□□□ -0.17
USE1-208ENST00000600970 DOCK11Q5JSL3 2073 aa14□□□□□ -0.17
USE1-208ENST00000600970 IFNL4K9M1U5 179 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 POLR3GO15318 223 aaPredicted RBP13.99□□□□□ -0.17
USE1-208ENST00000600970 IGF2P01344 180 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 SCG5P05408 212 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 VIMP08670 466 aaKnown RBP13.99□□□□□ -0.17
USE1-208ENST00000600970 COX5BP10606 129 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 RBM34P42696 430 aaKnown RBP13.99□□□□□ -0.17
USE1-208ENST00000600970 ERFP50548 548 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 TOP3AQ13472 1001 aaPredicted RBP13.99□□□□□ -0.17
USE1-208ENST00000600970 SELPLGQ14242 412 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 SLC27A4Q6P1M0 643 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 SYT9Q86SS6 491 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 PATL1Q86TB9 770 aaKnown RBP13.99□□□□□ -0.17
USE1-208ENST00000600970 NUDT16L1Q9BRJ7 211 aaKnown RBP13.99□□□□□ -0.17
USE1-208ENST00000600970 TMEM246Q9BRR3 403 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 STARD10Q9Y365 291 aa13.99□□□□□ -0.17
USE1-208ENST00000600970 A0A1W2PPL8 197 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 C12orf71A8MTZ7 269 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 MELTFP08582 738 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 MSR1P21757 451 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 GUCA1AP43080 201 aaPredicted RBP13.98□□□□□ -0.17
USE1-208ENST00000600970 MTPNP58546 118 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 BPIFB3P59826 476 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 FGF12P61328 243 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 RPL27P61353 136 aaKnown RBP13.98□□□□□ -0.17
USE1-208ENST00000600970 AGKQ53H12 422 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 ALG10Q5BKT4 473 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 GPR157Q5UAW9 335 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 RUSC1-AS1Q66K80 236 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 SLC30A8Q8IWU4 369 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 TMEM86BQ8N661 226 aa13.98□□□□□ -0.17
USE1-208ENST00000600970 FITM2Q8N6M3 262 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms