RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CDAP32320 146 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ENTPD1P49961 510 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 RPS7P62081 194 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 HIST1H3AP68431 136 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 RAB40BQ12829 278 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 AQP6Q13520 282 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ENDOGQ14249 297 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 SLC36A2Q495M3 483 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 HIST2H3PS2Q5TEC6 136 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 KLHL24Q6TFL4 600 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 HIST2H3AQ71DI3 136 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 SHFQ7M4L6 423 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 BCDIN3DQ7Z5W3 292 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 SKA3Q8IX90 412 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 WDR31Q8NA23 367 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ZNF511Q8NB15 262 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 OR51L1Q8NGJ5 315 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 CNIH3Q8TBE1 160 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 INTS14Q96SY0 518 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 CNN2Q99439 309 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ZNF416Q9BWM5 594 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 JAM3Q9BX67 310 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 YIPF3Q9GZM5 350 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ACTR6Q9GZN1 396 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 KCNN2Q9H2S1 579 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 RERGLQ9H628 205 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 SEC61A2Q9H9S3 476 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 CNOT2Q9NZN8 540 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 ATPIF1Q9UII2 106 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 EXOGQ9Y2C4 368 aaKnown RBP10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 PCDHGB1Q9Y5G3 927 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 SLC25A15Q9Y619 301 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 CUBNO60494 3623 aa10.16□□□□□ -0.78
CHMP2A-207ENST00000600804 IRGMA1A4Y4 181 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 FAM171A2A8MVW0 826 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 J3QRE1 110 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 WNT11O96014 354 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 IGKV3-15P01624 115 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 HLA-DQA2P01906 255 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SBK2P0C263 348 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ZNF823P16415 610 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 HOXC12P31275 282 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ARR3P36575 388 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 UBE2NP61088 152 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ZNF91Q05481 1191 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SCRN3Q0VDG4 424 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 MED21Q13503 144 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SGCAQ16586 387 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 KLHL22Q53GT1 634 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 C6orf141Q5SZD1 244 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 C9orf135Q5VTT2 229 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SLC18B1Q6NT16 456 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SLC16A14Q7RTX9 510 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SLC16A9Q7RTY1 509 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 OR10H5Q8NGA6 315 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 OTOSQ8NHW6 89 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 S100PBPQ96BU1 408 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ZMYND19Q96E35 227 aaPredicted RBP10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ZNF75AQ96N20 296 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 YTHDF1Q9BYJ9 559 aaKnown RBP10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 WDR76Q9H967 626 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ADGRL4Q9HBW9 690 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 SLC24A3Q9HC58 644 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 FKBP14Q9NWM8 211 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 ST6GALNAC2Q9UJ37 374 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 TIMM10BQ9Y5J6 103 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 TMEM14AQ9Y6G1 99 aa10.15□□□□□ -0.78
CHMP2A-207ENST00000600804 COL6A5A8TX70 2615 aa10.15□□□□□ -0.79
CHMP2A-207ENST00000600804 A0A096LPE4 126 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 A0A1W2PPZ6 126 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 TVP23AA6NH52 213 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 ZNF593O00488 134 aaPredicted RBP10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 MPZL1O95297 269 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 IGLV1-44P01699 117 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 OR2T7P0C7T2 308 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 COX5BP10606 129 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 EPXP11678 715 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 CBR1P16152 277 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 ALOX5APP20292 161 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 ADAM8P78325 824 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 TAB1Q15750 504 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 SMN1Q16637 294 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 HIKESHIQ53FT3 197 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 KRT80Q6KB66 452 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 TMEM53Q6P2H8 277 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 UGT2A3Q6UWM9 527 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 CDC20BQ86Y33 519 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 ERI1Q8IV48 349 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 GJC3Q8NFK1 279 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 OR2T27Q8NH04 317 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 NINJ1Q92982 152 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 MUCL1Q96DR8 90 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 FBXO17Q96EF6 278 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 RNFT2Q96EX2 444 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 CNBD2Q96M20 576 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 DACH2Q96NX9 599 aa10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 MYCBPQ99417 103 aaPredicted RBP10.14□□□□□ -0.79
CHMP2A-207ENST00000600804 SMR3AQ99954 134 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms