RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 LOC101059948A0A1B0GTJ6 334 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 RAB3DO95716 219 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 IGHMP01871 453 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 SLC26A5P58743 744 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 DCXRQ7Z4W1 244 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 TMED4Q7Z7H5 227 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 GPAT4Q86UL3 456 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF441Q8N8Z8 693 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 CTSFQ9UBX1 484 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 LOC107986453A0A1B0GWG9 222 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 METTL12A8MUP2 240 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 ADAM10O14672 748 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 ALOX12BO75342 701 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 MYF5P13349 255 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 GLULP15104 373 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 CRABP1P29762 137 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 TAS2R19P59542 299 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 HDDC2Q7Z4H3 204 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 ARL5BQ96KC2 179 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 DPYSL5Q9BPU6 564 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 HHLA2Q9UM44 414 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 R4GMQ9 66 aa18.12■□□□□ 0.49
SHKBP1-225ENST00000600733 CFAP54Q96N23 3096 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 IGKV1D-43A0A0B4J1Z2 117 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 FTCDNL1E5RQL4 147 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF217O75362 1048 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 FSTP19883 344 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 DNASE1L1P49184 302 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 SORDQ00796 357 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 SSBP1Q04837 148 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 CORO6Q6QEF8 472 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 SLC26A10Q8NG04 563 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 OR6M1Q8NGM8 313 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 G6PC2Q9NQR9 355 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 KCNMB2Q9Y691 235 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 WDR87Q6ZQQ6 2873 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 IGHV1OR21-1A0A087WYE8 117 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 TMEM82A0PJX8 343 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 MFSD2BA6NFX1 497 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 TEX46H3BTG2 121 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 AMY2AP04746 511 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 GABRA1P14867 456 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 PPP3CBP16298 524 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 TOMM20Q15388 145 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 B3GNTL1Q67FW5 361 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 RGS7BPQ6MZT1 257 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 OGFOD3Q6PK18 319 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 ADGRE4PQ86SQ3 457 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF454Q8N9F8 522 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 GALNT11Q8NCW6 608 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 LINC00052Q96N35 136 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 OR52A1Q9UKL2 312 aa18.11■□□□□ 0.49
SHKBP1-225ENST00000600733 MS4A18H0YCH9 400 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 SMAD9O15198 467 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 B3GALNT1O75752 331 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 OR4E1P0C645 316 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 HNRNPKP61978 463 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 PMPCAQ10713 525 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 NR0B2Q15466 257 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 MS4A18Q3C1V0 323 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 GSG1LQ6UXU4 331 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 TMEM229BQ8NBD8 167 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 THAP3Q8WTV1 239 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 POTEKPQ9BYX7 375 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 DUSP15Q9H1R2 295 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 C1orf198Q9H425 327 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 FARSAQ9Y285 508 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 TMEM235A6NFC5 223 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 EIF1AYO14602 144 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 OR2T1O43869 369 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF354AO60765 605 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 SNAPC5O75971 98 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF823P16415 610 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 OR7A5Q15622 319 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 OR4D6Q8NGJ1 314 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 ST7LQ8TDW4 575 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 SCARB1Q8WTV0 552 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 NKD1Q969G9 470 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 PMEPA1Q969W9 287 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 LMAN1LQ9HAT1 526 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 MED11Q9P086 117 aa18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF230Q9UIE0 474 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-225ENST00000600733 CABIN1Q9Y6J0 2220 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 TMEM269A0A1B0GVZ9 245 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 SULT1C2O00338 296 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF28P17035 718 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ARRB1P49407 418 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 MPPED2Q15777 294 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 C17orf107Q6ZR85 190 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ZNF248Q8NDW4 579 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ASB10Q8WXI3 467 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 DMRTA2Q96SC8 542 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ALX4Q9H161 411 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 MED29Q9NX70 200 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 KLK13Q9UKR3 277 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 FBXO4Q9UKT5 387 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 A0A1B0GX78 115 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 P2RY10O00398 339 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 LDLRAD4O15165 306 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 CYB5AP00167 134 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms