RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SVOPLQ8N434 492 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 SDR9C7Q8NEX9 313 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 OR2T33Q8NG76 320 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 AKR7LQ8NHP1 331 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 C11orf40Q8WZ69 217 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 UTP4Q969X6 686 aaKnown RBP13.91□□□□□ -0.18
LSM4-206ENST00000600289 MRPL37Q9BZE1 423 aaKnown RBP13.91□□□□□ -0.18
LSM4-206ENST00000600289 ARMC1Q9NVT9 282 aa13.91□□□□□ -0.18
LSM4-206ENST00000600289 IGLV3-9A0A075B6K5 115 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 TRIM64A6NGJ6 449 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 TRIM64BA6NI03 449 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 DEAF1O75398 565 aaPredicted RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 CCL2P13500 99 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 ZNF250P15622 560 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 GDI2P50395 445 aaKnown RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 HIST1H3AP68431 136 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 GLO1Q04760 184 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 ZNF362Q5T0B9 420 aaPredicted RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 HIST2H3PS2Q5TEC6 136 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 RGS7BPQ6MZT1 257 aaPredicted RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 ZNF774Q6NX45 483 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 HIST2H3AQ71DI3 136 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 CIARTQ8N365 385 aaPredicted RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 SLC26A10Q8NG04 563 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 OR52E2Q8NGJ4 325 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 OR4Q3Q8NH05 313 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 DNAJC9Q8WXX5 260 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 TSSK2Q96PF2 358 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 SORCS2Q96PQ0 1159 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 TSSK6Q9BXA6 273 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 NTN4Q9HB63 628 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 MYOZ1Q9NP98 299 aaPredicted RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 RPRD1BQ9NQG5 326 aaKnown RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 PDP1Q9P0J1 537 aaPredicted RBP13.9□□□□□ -0.18
LSM4-206ENST00000600289 REV1Q9UBZ9 1251 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 KLHL21Q9UJP4 597 aa13.9□□□□□ -0.18
LSM4-206ENST00000600289 C5orf49A4QMS7 147 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 RNF212BA8MTL3 300 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 H3BSA7 217 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 H7C1Q1 480 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 SGCEO43556 437 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 SYNGR3O43761 229 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 SSX4O60224 188 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 DOK2O60496 412 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 E2F6O75461 281 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 SOX14O95416 240 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
LSM4-206ENST00000600289 ANXA8P13928 327 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 WNT5AP41221 380 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 TNK1Q13470 666 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 SHQ1Q6PI26 577 aaKnown RBP13.89□□□□□ -0.19
LSM4-206ENST00000600289 VASH1Q7L8A9 365 aaPredicted RBP13.89□□□□□ -0.19
LSM4-206ENST00000600289 OR10H5Q8NGA6 315 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 TEX47Q8TBZ9 253 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 NEU4Q8WWR8 484 aaPredicted RBP13.89□□□□□ -0.19
LSM4-206ENST00000600289 FOXN4Q96NZ1 517 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 RBM4Q9BWF3 364 aaKnown RBP13.89□□□□□ -0.19
LSM4-206ENST00000600289 RAB1BQ9H0U4 201 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 RERGLQ9H628 205 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 KCNG2Q9UJ96 466 aa13.89□□□□□ -0.19
LSM4-206ENST00000600289 SONP18583 2426 aaKnown RBP13.89□□□□□ -0.19
LSM4-206ENST00000600289 OR6C6A6NF89 314 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 M0R233 179 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 MPZL1O95297 269 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 FAM157BP0CG42 384 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 TUBG1P23258 451 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 GRK5P34947 590 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 ARHGDIAP52565 204 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 SLC25A1P53007 311 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 CCNIQ14094 377 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 ATP6AP1Q15904 470 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 SLC36A3Q495N2 470 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 SLC35F1Q5T1Q4 408 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 CLEC2AQ6UVW9 174 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 CCDC121Q6ZUS5 278 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 ZNF101Q8IZC7 436 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 SLC37A3Q8NCC5 494 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 GJC3Q8NFK1 279 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 OR2T4Q8NH00 348 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 IPCEF1Q8WWN9 437 aaPredicted RBP13.88□□□□□ -0.19
LSM4-206ENST00000600289 NMNAT2Q9BZQ4 307 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 MS4A5Q9H3V2 200 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
LSM4-206ENST00000600289 TUBG2Q9NRH3 451 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 CMC2Q9NRP2 79 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 EIF3KQ9UBQ5 218 aaKnown RBP13.88□□□□□ -0.19
LSM4-206ENST00000600289 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
LSM4-206ENST00000600289 YLPM1P49750 1951 aaKnown RBP13.88□□□□□ -0.19
LSM4-206ENST00000600289 J3QW42 95 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 NDUFS8O00217 210 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 TIPRLO75663 272 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 CIB2O75838 187 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 IFNGP01579 166 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 TFP02787 698 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 ERCC1P07992 297 aaPredicted RBP13.87□□□□□ -0.19
LSM4-206ENST00000600289 FCGR1AP12314 374 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 OSMP13725 252 aa13.87□□□□□ -0.19
LSM4-206ENST00000600289 KLF3P57682 345 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms