RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 VSTM5A8MXK1 200 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 PRR23D1E9PI22 279 aaPredicted RBP17■□□□□ 0.31
SHKBP1-214ENST00000597396 SGCEO43556 437 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 DOK2O60496 412 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 TFP02787 698 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 PRR23D2P0DMB1 279 aaPredicted RBP17■□□□□ 0.31
SHKBP1-214ENST00000597396 CLUP10909 449 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 ZNF823P16415 610 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 NR4A1P22736 598 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 FMO3P31513 532 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 SNAPC1Q16533 368 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 ARFGEF3Q5TH69 2177 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 OR6K6Q8NGW6 343 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 OR2AJ1Q8NGZ0 328 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 TVP23BQ9NYZ1 205 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 C2CD3Q4AC94 2353 aa17■□□□□ 0.31
SHKBP1-214ENST00000597396 TVP23AA6NH52 213 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 EI24O14681 340 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 SMPD2O60906 423 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 TMCC2O75069 709 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 SNAP29O95721 258 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 THBS4P35443 961 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 HTR5AP47898 357 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 ART1P52961 327 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 BLVRAP53004 296 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 TESK1Q15569 626 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 PLBD1Q6P4A8 553 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 DTX2Q86UW9 622 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 PAQR4Q8N4S7 273 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 GJC3Q8NFK1 279 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 ZNRF4Q8WWF5 429 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 C9orf16Q9BUW7 83 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 TRAF4Q9BUZ4 470 aaPredicted RBP16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 OR51V1Q9H2C8 321 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 OR51B6Q9H340 312 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 RIBC2Q9H4K1 309 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 ZNF442Q9H7R0 627 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 CBLN4Q9NTU7 201 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 MRPL22Q9NWU5 206 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 KCNG2Q9UJ96 466 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 NDRG4Q9ULP0 352 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 LHFPL6Q9Y693 200 aa16.99■□□□□ 0.31
SHKBP1-214ENST00000597396 HIVEP1P15822 2718 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 C5orf49A4QMS7 147 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 FAM157BP0CG42 384 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 RPS23P62266 143 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 ADAM8P78325 824 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 NKX6-1P78426 367 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 CORO6Q6QEF8 472 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 VASH1Q7L8A9 365 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 LINC00346Q8IVM7 164 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 POM121L2Q96KW2 1035 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 HCAR1Q9BXC0 346 aa16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 HINT3Q9NQE9 182 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 EIF3KQ9UBQ5 218 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-214ENST00000597396 LOC100509620A0A075B734 347 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 ZAR1LA6NP61 321 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 RER1O15258 196 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 CD8AP01732 235 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 ALPLP05186 524 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 OR4A8P0C604 315 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 COX5BP10606 129 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 EPHA2P29317 976 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 GLRXP35754 106 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 SERPINF1P36955 418 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 ALDH3A2P51648 485 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 RAD23AP54725 363 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 RAB35Q15286 201 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 KLHL12Q53G59 568 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 SLX4IPQ5VYV7 408 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 LYPD4Q6UWN0 246 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 CXXC5Q7LFL8 322 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 CPOQ8IVL8 374 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 CBR4Q8N4T8 237 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 ZNF511Q8NB15 262 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 IGFBPL1Q8WX77 278 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 PTP4A1Q93096 173 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 FOXC2Q99958 501 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 GABARAPL3Q9BY60 117 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 USE1Q9NZ43 259 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 CMAHPQ9Y471 501 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 COMMD3-BMI1R4GMX3 469 aa16.97■□□□□ 0.31
SHKBP1-214ENST00000597396 CELSR1Q9NYQ6 3014 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 PRRC2AP48634 2157 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 GPRIN2O60269 458 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 GLCEO94923 617 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 PCSK6P29122 969 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 CDKN1AP38936 164 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 RAD52P43351 418 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 ENTPD1P49961 510 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 RPS7P62081 194 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 RCN1Q15293 331 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 ADIPOQQ15848 244 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 CCDC92Q53HC0 331 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 SLC18B1Q6NT16 456 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 TMEM154Q6P9G4 183 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 SPNS3Q6ZMD2 512 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 ZBTB49Q6ZSB9 765 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 OR1F12Q8NHA8 337 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 EME1Q96AY2 570 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms