RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 GPANK1O95872 356 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 LCKP06239 509 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 ADRA2AP08913 450 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 CCNOP22674 350 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.09■□□□□ 0.49
PNKP-209ENST00000596726 COX10Q12887 443 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 SLC35F1Q5T1Q4 408 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 OTPQ5XKR4 325 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 ZNF101Q8IZC7 436 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 LNX2Q8N448 690 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 MAPK1IP1LQ8NDC0 245 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 NEU4Q8WWR8 484 aaPredicted RBP18.09■□□□□ 0.49
PNKP-209ENST00000596726 FAM168AQ92567 244 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 FEVQ99581 238 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 NIPSNAP1Q9BPW8 284 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 TSSK6Q9BXA6 273 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 MMADHCQ9H3L0 296 aaPredicted RBP18.09■□□□□ 0.49
PNKP-209ENST00000596726 DYNLRB1Q9NP97 96 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 RPRD1BQ9NQG5 326 aaKnown RBP18.09■□□□□ 0.49
PNKP-209ENST00000596726 DUSP13Q9UII6 198 aa18.09■□□□□ 0.49
PNKP-209ENST00000596726 NDRG4Q9ULP0 352 aaKnown RBP18.09■□□□□ 0.49
PNKP-209ENST00000596726 C2CD3Q4AC94 2353 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 M0R233 179 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 SGCEO43556 437 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 CLPTM1O96005 669 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 SLC25A16P16260 332 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 HIST1H3AP68431 136 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 CBX1P83916 185 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 DBPQ10586 325 aaPredicted RBP18.08■□□□□ 0.48
PNKP-209ENST00000596726 HIST2H3PS2Q5TEC6 136 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 HIST2H3AQ71DI3 136 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 VASH1Q7L8A9 365 aaPredicted RBP18.08■□□□□ 0.48
PNKP-209ENST00000596726 OR1J1Q8NGS3 322 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 OR4Q3Q8NH05 313 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 SYNPRQ8TBG9 265 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 MS4A5Q9H3V2 200 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 YY1AP1Q9H869 796 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 MYOZ1Q9NP98 299 aaPredicted RBP18.08■□□□□ 0.48
PNKP-209ENST00000596726 TBC1D23Q9NUY8 699 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 ASH2LQ9UBL3 628 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 EIF3KQ9UBQ5 218 aaKnown RBP18.08■□□□□ 0.48
PNKP-209ENST00000596726 REV1Q9UBZ9 1251 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 BAIAP2Q9UQB8 552 aa18.08■□□□□ 0.48
PNKP-209ENST00000596726 NSD1Q96L73 2696 aaPredicted RBP18.08■□□□□ 0.48
PNKP-209ENST00000596726 ABCA1O95477 2261 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 GNGT2O14610 69 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 DOK2O60496 412 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 ALDH3B1P43353 468 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 PDLIM4P50479 330 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 RIPPLY3P57055 190 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 KRTAP1-1Q07627 177 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 MEP1BQ16820 701 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 CCDC92Q53HC0 331 aaPredicted RBP18.07■□□□□ 0.48
PNKP-209ENST00000596726 C1orf174Q8IYL3 243 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 SLC26A10Q8NG04 563 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 FN3KQ9H479 309 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 ARMC1Q9NVT9 282 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 DNAJB9Q9UBS3 223 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 LHFPL6Q9Y693 200 aa18.07■□□□□ 0.48
PNKP-209ENST00000596726 OR6C6A6NF89 314 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 VWC2LB2RUY7 222 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 NDUFS8O00217 210 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 SOX14O95416 240 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 TFP02787 698 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 ERCC1P07992 297 aaPredicted RBP18.06■□□□□ 0.48
PNKP-209ENST00000596726 CENPAP49450 140 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 ERFP50548 548 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 KLF3P57682 345 aaPredicted RBP18.06■□□□□ 0.48
PNKP-209ENST00000596726 SELENOVP59797 346 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 GLO1Q04760 184 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 MAD2L1BPQ15013 274 aaPredicted RBP18.06■□□□□ 0.48
PNKP-209ENST00000596726 UNQ6126/PRO20091Q6UXV3 157 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 RFPL4BQ6ZWI9 263 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 Q71RC1 249 aaPredicted RBP18.06■□□□□ 0.48
PNKP-209ENST00000596726 SLC37A3Q8NCC5 494 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 MARS2Q96GW9 593 aaKnown RBP18.06■□□□□ 0.48
PNKP-209ENST00000596726 C4orf45Q96LM5 186 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 TPK1Q9H3S4 243 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 PLEK2Q9NYT0 353 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 PDP1Q9P0J1 537 aaPredicted RBP18.06■□□□□ 0.48
PNKP-209ENST00000596726 TAAR3PQ9P1P4 343 aa18.06■□□□□ 0.48
PNKP-209ENST00000596726 A0A1W2PPW3 197 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 LOC390937A0A1W2PQ73 354 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 RER1O15258 196 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 NGFP01138 241 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 IGHV3-13P01766 116 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 HTR5AP47898 357 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 TEKQ02763 1124 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 ZNF718Q3SXZ3 478 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 CYB561A3Q8NBI2 242 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 GJC3Q8NFK1 279 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 OR2T33Q8NG76 320 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 SLC25A40Q8TBP6 338 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 RBM4Q9BWF3 364 aaKnown RBP18.05■□□□□ 0.48
PNKP-209ENST00000596726 ELOVL3Q9HB03 270 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 NTN4Q9HB63 628 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 TBCCD1Q9NVR7 557 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 SLCO1C1Q9NYB5 712 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 ATPIF1Q9UII2 106 aa18.05■□□□□ 0.48
PNKP-209ENST00000596726 DAOP14920 347 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms