RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZBTB46Q86UZ6 589 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 SAMD8Q96LT4 415 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 DDOQ99489 341 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 BPESC1Q9GZL8 116 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 HINT3Q9NQE9 182 aaKnown RBP11.16□□□□□ -0.62
USE1-207ENST00000596136 TUBG2Q9NRH3 451 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 TBCCD1Q9NVR7 557 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 TMEM160Q9NX00 188 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 NDRG4Q9ULP0 352 aaKnown RBP11.16□□□□□ -0.62
USE1-207ENST00000596136 B9D1Q9UPM9 204 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 SVEP1Q4LDE5 3571 aa11.16□□□□□ -0.62
USE1-207ENST00000596136 A0A1W2PPW3 197 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR6C6A6NF89 314 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
USE1-207ENST00000596136 BHLHE40O14503 412 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 SGCEO43556 437 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 LILRA1O75019 489 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 MPZL1O95297 269 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 NGFP01138 241 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 GASTP01350 101 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 RAP2AP10114 183 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 GAAP10253 952 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 NAT2P11245 290 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 CCNOP22674 350 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 COL8A2P25067 703 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 GZMKP49863 264 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 GK3PQ14409 553 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 MICAQ29983 383 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 PCGF3Q3KNV8 242 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 FAM98BQ52LJ0 330 aaKnown RBP11.15□□□□□ -0.62
USE1-207ENST00000596136 TMEM255AQ5JRV8 349 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 ZNF362Q5T0B9 420 aaPredicted RBP11.15□□□□□ -0.62
USE1-207ENST00000596136 CYB5R2Q6BCY4 276 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR2T5Q6IEZ7 315 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 RPL13AP3Q6NVV1 102 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 DNM1P34Q6PK57 102 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 RASSF6Q6ZTQ3 369 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 RFPL4BQ6ZWI9 263 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
USE1-207ENST00000596136 HIPK1Q86Z02 1210 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR6V1Q8N148 313 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR9Q2Q8NGE9 314 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR2T29Q8NH02 315 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 KLF14Q8TD94 323 aaPredicted RBP11.15□□□□□ -0.62
USE1-207ENST00000596136 RDH5Q92781 318 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 SLC7A6OSQ96CW6 309 aaPredicted RBP11.15□□□□□ -0.62
USE1-207ENST00000596136 CLPTM1LQ96KA5 538 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 C4orf45Q96LM5 186 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 THTPAQ9BU02 230 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 IFT27Q9BW83 186 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 DGCR6LQ9BY27 220 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 RACGAP1Q9H0H5 632 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR51B6Q9H340 312 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 ELOVL3Q9HB03 270 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 VNN3Q9NY84 501 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 KLHL21Q9UJP4 597 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 CDH10Q9Y6N8 788 aa11.15□□□□□ -0.62
USE1-207ENST00000596136 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 AQP12BA6NM10 295 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 NCR1O76036 304 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 UBOX5O94941 541 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 CCNB2O95067 398 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 RENP00797 406 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 ADH4P08319 380 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 HOXB6P17509 224 aaKnown RBP11.14□□□□□ -0.63
USE1-207ENST00000596136 ACHEP22303 614 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 MMP15P51511 669 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 TMEM33P57088 247 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 GGTLC2Q14390 218 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 CARTPTQ16568 116 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 CCDC92Q53HC0 331 aaPredicted RBP11.14□□□□□ -0.63
USE1-207ENST00000596136 LEG1Q6P5S2 330 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 ARL9Q6T311 187 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 JAZF1Q86VZ6 243 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 PRIMA1Q86XR5 153 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 AQP12AQ8IXF9 295 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 ADGRG5Q8IZF4 528 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 NPEPL1Q8NDH3 523 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 SLC26A10Q8NG04 563 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 OR4K13Q8NH42 304 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 SLC25A40Q8TBP6 338 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 HPS1Q92902 700 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 OR2J1Q9GZK6 312 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 EGLN3Q9H6Z9 239 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 CHODLQ9H9P2 273 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 SRA1Q9HD15 236 aaKnown RBP11.14□□□□□ -0.63
USE1-207ENST00000596136 ASH2LQ9UBL3 628 aa11.14□□□□□ -0.63
USE1-207ENST00000596136 ATRQ13535 2644 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 J3QW42 95 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 DOK2O60496 412 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 RP2O75695 350 aa11.13□□□□□ -0.63
USE1-207ENST00000596136 TFP02787 698 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms