RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 RER1O15258 196 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 SYNGR3O43761 229 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 MITFO75030 526 aaPredicted RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 E2F6O75461 281 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 RENP00797 406 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 ADRA2AP08913 450 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 CLUP10909 449 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 HOXB6P17509 224 aaKnown RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 PCSK6P29122 969 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 CRABP1P29762 137 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 APLNRP35414 380 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 GGT2P36268 569 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 GUCA1AP43080 201 aaPredicted RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 ALDH3B1P43353 468 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 CENPAP49450 140 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 DAPP51397 102 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 PCBD1P61457 104 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 GALK2Q01415 458 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 TEKQ02763 1124 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 RAB35Q15286 201 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 ATP6AP1Q15904 470 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 FAHD1Q6P587 224 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 SHQ1Q6PI26 577 aaKnown RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 RFPL4BQ6ZWI9 263 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 AMIGO2Q86SJ2 522 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 LINC00346Q8IVM7 164 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 ZNF525Q8N782 197 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 LRTOMTQ8WZ04 291 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 GTF3AQ92664 365 aaKnown RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 COX4I2Q96KJ9 171 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 C1orf198Q9H425 327 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 POFUT1Q9H488 388 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 YY1AP1Q9H869 796 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 MED20Q9H944 212 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 AP4S1Q9Y587 144 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 FKBP7Q9Y680 259 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 PMF1-BGLAPU3KQ54 211 aa9.57□□□□□ -0.88
VRK3-210ENST00000596121 SETD2Q9BYW2 2564 aaPredicted RBP9.57□□□□□ -0.88
VRK3-210ENST00000596121 IGHV4-30-2A0A087WSY4 118 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 TVP23AA6NH52 213 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 FAM183AA6NL82 134 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 H3BNX3 289 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 SGCEO43556 437 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 PTHP01270 115 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 GYPBP06028 91 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 DBHP09172 617 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 OSMP13725 252 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 ZNF250P15622 560 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 POU1F1P28069 291 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 MPV17P39210 176 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 RPS27P42677 84 aaKnown RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 GDI2P50395 445 aaKnown RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 EFNA4P52798 201 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 SNRPD2P62316 118 aaKnown RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 AQP6Q13520 282 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 GINS1Q14691 196 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 KPNB1Q14974 876 aaKnown RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 SPATA46Q5T0L3 261 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 TMEM236Q5W0B7 351 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 MAPK1IP1LQ8NDC0 245 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 OR2T33Q8NG76 320 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 OR10H5Q8NGA6 315 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 OR1J2Q8NGS2 313 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 PTP4A1Q93096 173 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 NRBF2Q96F24 287 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 C18orf12Q96KH6 178 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 VRK1Q99986 396 aaPredicted RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 SPEF1Q9Y4P9 236 aa9.56□□□□□ -0.88
VRK3-210ENST00000596121 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
VRK3-210ENST00000596121 IGLV3-9A0A075B6K5 115 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 A0A096LNT2 108 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 H3BN98 237 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 EBAG9O00559 213 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 DOK2O60496 412 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ICMTO60725 284 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 DEAF1O75398 565 aaPredicted RBP9.55□□□□□ -0.88
VRK3-210ENST00000596121 LCKP06239 509 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 INHBBP09529 407 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 COX5BP10606 129 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ANXA8P13928 327 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 FOSL1P15407 271 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 SPI1P17947 270 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ANOS1P23352 680 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 EPHA2P29317 976 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 GRK5P34947 590 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 EVX1P49640 407 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 PPOXP50336 477 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 NUDT6P53370 316 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ACTR3P61158 418 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 CDK5Q00535 292 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 SCRN3Q0VDG4 424 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 ALKBH6Q3KRA9 238 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 KRTAP27-1Q3LI81 207 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 LINC01590Q5TEZ4 76 aa9.55□□□□□ -0.88
VRK3-210ENST00000596121 RGS7BPQ6MZT1 257 aaPredicted RBP9.55□□□□□ -0.88
VRK3-210ENST00000596121 SLC18B1Q6NT16 456 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms