RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 OTOGQ6ZRI0 2925 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 M0R129 80 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 RER1O15258 196 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SGCEO43556 437 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 ZNF3P17036 446 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SPI1P17947 270 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 EPHA2P29317 976 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SERPINF1P36955 418 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 WNT5AP41221 380 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 GDI2P50395 445 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 CRISP1P54107 249 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 LSM6P62312 80 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 GLO1Q04760 184 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 GABPB1Q06547 395 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SCRN3Q0VDG4 424 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 AQP6Q13520 282 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 ZSCAN26Q16670 478 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 CCDC92Q53HC0 331 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 KDM4DQ6B0I6 523 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 VASH1Q7L8A9 365 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SYT9Q86SS6 491 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SVOPLQ8N434 492 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 WFDC11Q8NEX6 87 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 POM121L2Q96KW2 1035 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 CIB1Q99828 191 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 GSX2Q9BZM3 304 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 C1orf198Q9H425 327 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 ZNF442Q9H7R0 627 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 S100A14Q9HCY8 104 aa11.88□□□□□ -0.51
SHKBP1-207ENST00000595631 TMEM129A0AVI4 362 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 SURF4O15260 269 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 SNAP29O95721 258 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 PTHP01270 115 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 GGT2P36268 569 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 HTR5AP47898 357 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 SLC25A1P53007 311 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 ATP5J2P56134 94 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 ADAM8P78325 824 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 Q5PR19 223 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 ZFP1Q6P2D0 407 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 PLBD1Q6P4A8 553 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 TMEM154Q6P9G4 183 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 CFAP77Q6ZQR2 320 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 RFPL4BQ6ZWI9 263 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 ZNF101Q8IZC7 436 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 PARP8Q8N3A8 854 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 ZNF511Q8NB15 262 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 OR10H5Q8NGA6 315 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 OR1J2Q8NGS2 313 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 OR6K6Q8NGW6 343 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 DNAJC9Q8WXX5 260 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 SYT3Q9BQG1 590 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 WDR76Q9H967 626 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 HINT3Q9NQE9 182 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 MYEF2Q9P2K5 600 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-207ENST00000595631 MED13LQ71F56 2210 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 SYNGR3O43761 229 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 IGHV4-39P01824 125 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 DBHP09172 617 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 PAX1P15863 534 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 IGFBP5P24593 272 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 GLRXP35754 106 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 POLR2IP36954 125 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 HIST1H3AP68431 136 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 PPP2R2BQ00005 443 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 PTGES3Q15185 160 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 EFNB3Q15768 340 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 HIST2H3PS2Q5TEC6 136 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 LINC01590Q5TEZ4 76 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 SLC18B1Q6NT16 456 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 HIST2H3AQ71DI3 136 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 BBS1Q8NFJ9 593 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 PTP4A1Q93096 173 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 OSBPL10Q9BXB5 764 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 GRIP2Q9C0E4 1043 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 OR51V1Q9H2C8 321 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 TVP23BQ9NYZ1 205 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 CMAHPQ9Y471 501 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 SPEF1Q9Y4P9 236 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 COMMD3-BMI1R4GMX3 469 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 CR1P17927 2039 aa11.86□□□□□ -0.51
SHKBP1-207ENST00000595631 OR6C6A6NF89 314 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 B9A039 149 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 PRKYO43930 277 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 LY6HO94772 140 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 CLPTM1O96005 669 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 NGFP01138 241 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 HMGN1P05114 100 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 LCKP06239 509 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 SPARCP09486 303 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 ZNF823P16415 610 aa11.85□□□□□ -0.51
SHKBP1-207ENST00000595631 UCP2P55851 309 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms