RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OR11A1Q9GZK7 315 aa14.82□□□□□ -0.04
LIG1-206ENST00000594067 ZMAT3Q9HA38 289 aaKnown RBP14.82□□□□□ -0.04
LIG1-206ENST00000594067 TMED7-TICAM2A0A0A6YYA0 188 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 DCDC2BA2VCK2 349 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 MPTX1A8MV57 137 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 MELTFP08582 738 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 OR4E1P0C645 316 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 CFPP27918 469 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 ARHGDIBP52566 201 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 DEFA5Q01523 94 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 PLCXD2Q0VAA5 305 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 EBPQ15125 230 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 MOB3CQ70IA8 216 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 TMED4Q7Z7H5 227 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 C12orf45Q8N5I9 185 aaPredicted RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 OR51A2Q8NGJ7 313 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 SEH1LQ96EE3 360 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 TMED7Q9Y3B3 224 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 LRP12Q9Y561 859 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 ABCD4O14678 606 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 SMAD9O15198 467 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 PMS2P2O95744 297 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 UBBP0CG47 229 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 UBCP0CG48 685 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 PGCP20142 388 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 HTR2CP28335 458 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 RIDAP52758 137 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 RPS27AP62979 156 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 UBA52P62987 128 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 VWA2Q5GFL6 755 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 GLT8D1Q68CQ7 371 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 OR10K2Q6IF99 312 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 THRSPQ92748 146 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 TINAGL1Q9GZM7 467 aaPredicted RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 MMACHCQ9Y4U1 282 aa14.81□□□□□ -0.04
LIG1-206ENST00000594067 MRPS18BQ9Y676 258 aaKnown RBP14.81□□□□□ -0.04
LIG1-206ENST00000594067 IGKV3D-11A0A0A0MRZ8 115 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 A0A1W2PPC1 479 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 FITM1A5D6W6 292 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 TLCD2A6NGC4 264 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 TSPAN2O60636 221 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 RAB3DO95716 219 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 ELOCQ15369 112 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 PDSS1Q5T2R2 415 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 KCTD18Q6PI47 426 aaPredicted RBP14.8□□□□□ -0.04
LIG1-206ENST00000594067 CATSPERDQ86XM0 798 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 GALNT16Q8N428 558 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 SLC25A44Q96H78 314 aaPredicted RBP14.8□□□□□ -0.04
LIG1-206ENST00000594067 TPSD1Q9BZJ3 242 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 TXNIPQ9H3M7 391 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 TAS2R3Q9NYW6 316 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 CKLFQ9UBR5 152 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 COA3Q9Y2R0 106 aaPredicted RBP14.8□□□□□ -0.04
LIG1-206ENST00000594067 ARID1BQ8NFD5 2236 aaPredicted RBP14.8□□□□□ -0.04
LIG1-206ENST00000594067 A0A0D9SG52 128 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 SHISA7A6NL88 538 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 ALG1L2C9J202 215 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 HLA-DOBP13765 273 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 ROM1Q03395 351 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 SPOCK1Q08629 439 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 ELP2Q6IA86 826 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 BPIFCQ8NFQ6 507 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 CMKLR1Q99788 373 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 SLC17A5Q9NRA2 495 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 VSX1Q9NZR4 365 aaPredicted RBP14.8□□□□□ -0.04
LIG1-206ENST00000594067 NUP210LQ5VU65 1888 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 THADAQ6YHU6 1953 aa14.8□□□□□ -0.04
LIG1-206ENST00000594067 LILRA5A6NI73 299 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 ALOX12BO75342 701 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 MT-ATP6P00846 226 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 CD8AP01732 235 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 CD2P06729 351 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 IL11P20809 199 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 TAS2R19P59542 299 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 ACTBP60709 375 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 ACTG1P63261 375 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DEFB133Q30KQ1 61 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 PABPC1L2AQ5JQF8 200 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 C1orf140Q5VVS0 124 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 JMJD6Q6NYC1 403 aaPredicted RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 BEST3Q8N1M1 668 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 SLC41A2Q96JW4 573 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 ZNF587Q96SQ5 575 aaPredicted RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 PRMT8Q9NR22 394 aaPredicted RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 EMC9Q9Y3B6 208 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 MYO15AQ9UKN7 3530 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 SPEGQ15772 3267 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 A0A1B0GW55 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 TMEM82A0PJX8 343 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 AMY2AP04746 511 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4L2P0CJ85 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4L3P0CJ86 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4L4P0CJ87 422 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4L5P0CJ88 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4L6P0CJ89 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 DUX4L7P0CJ90 424 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 AGTR1P30556 359 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 MC2RQ01718 297 aa14.79□□□□□ -0.04
LIG1-206ENST00000594067 SSBP1Q04837 148 aaKnown RBP14.79□□□□□ -0.04
LIG1-206ENST00000594067 ELAVL1Q15717 326 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms