RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 NAXDQ8IW45 347 aa17.55■□□□□ 0.4
CLIP3-206ENST00000593074 GTPBP8Q8N3Z3 284 aaPredicted RBP17.55■□□□□ 0.4
CLIP3-206ENST00000593074 C11orf40Q8WZ69 217 aa17.55■□□□□ 0.4
CLIP3-206ENST00000593074 SLC25A44Q96H78 314 aaPredicted RBP17.55■□□□□ 0.4
CLIP3-206ENST00000593074 ANGPTL4Q9BY76 406 aa17.55■□□□□ 0.4
CLIP3-206ENST00000593074 GHITMQ9H3K2 345 aa17.55■□□□□ 0.4
CLIP3-206ENST00000593074 IGHG1P01857 330 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 ACHEP22303 614 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 CCR6P51684 374 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 AP3S2P59780 193 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 PLA2G7Q13093 441 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 SF3B4Q15427 424 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLIP3-206ENST00000593074 ARMC10Q8N2F6 343 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 TRAF4Q9BUZ4 470 aaPredicted RBP17.54■□□□□ 0.4
CLIP3-206ENST00000593074 CYB5R1Q9UHQ9 305 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 OR52A1Q9UKL2 312 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 TCFL5Q9UL49 500 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 HHLA2Q9UM44 414 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 RCE1Q9Y256 329 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 LOC102725191A0A1B0GVB3 256 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 LOC107986453A0A1B0GWG9 222 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 FAM172BPA6NC97 362 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 AQP7P3A6NL99 342 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 ZNF814B7Z6K7 855 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 GLSO94925 669 aaPredicted RBP17.54■□□□□ 0.4
CLIP3-206ENST00000593074 JMJD7P0C870 316 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 TMIGD3P0DMS9 266 aaPredicted RBP17.54■□□□□ 0.4
CLIP3-206ENST00000593074 LAP3P28838 519 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 BCL2A1Q16548 175 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 CORO6Q6QEF8 472 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 BTN2A1Q7KYR7 527 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 PAQR8Q8TEZ7 354 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 OXGR1Q96P68 337 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 PROK2Q9HC23 129 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 CKLFQ9UBR5 152 aa17.54■□□□□ 0.4
CLIP3-206ENST00000593074 NCOR1O75376 2440 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 BDP1A6H8Y1 2624 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 ANKRD20A5PA0PJZ0 165 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 ACOT7O00154 380 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 XRCC3O43542 346 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 CCL3P10147 92 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 CD37P11049 281 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 SFTPDP35247 375 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 MMP16P51512 607 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 MLF1P58340 268 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 CLRN1P58418 232 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 CDK10Q15131 360 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 RAB11BQ15907 218 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 KIF26BQ2KJY2 2108 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 TMEM176BQ3YBM2 270 aaPredicted RBP17.53■□□□□ 0.4
CLIP3-206ENST00000593074 ANKRD16Q6P6B7 361 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 ZNF704Q6ZNC4 412 aaPredicted RBP17.53■□□□□ 0.4
CLIP3-206ENST00000593074 TIPARPQ7Z3E1 657 aaKnown RBP17.53■□□□□ 0.4
CLIP3-206ENST00000593074 TMEM156Q8N614 296 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 OR10H5Q8NGA6 315 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 OR6X1Q8NH79 312 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 DDA1Q9BW61 102 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 HRASLSQ9HDD0 168 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 KLK11Q9UBX7 282 aa17.53■□□□□ 0.4
CLIP3-206ENST00000593074 TMEM269A0A1B0GVZ9 245 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 PMS2P1A4D2B8 440 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 C1QBP02746 253 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 H2BFMP0C1H6 154 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 UBCP0CG48 685 aaKnown RBP17.52■□□□□ 0.4
CLIP3-206ENST00000593074 OTX2P32243 289 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 RPS18P62269 152 aaKnown RBP17.52■□□□□ 0.4
CLIP3-206ENST00000593074 LRFN4Q6PJG9 635 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 PPP1R32Q7Z5V6 425 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 GPAT4Q86UL3 456 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 OR51D1Q8NGF3 324 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 CT55Q8WUE5 264 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 NIPAL2Q9H841 368 aa17.52■□□□□ 0.4
CLIP3-206ENST00000593074 NAP1L6A6NFF2 107 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 ICAM2P13598 275 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 LIFP15018 202 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 DCTDP32321 178 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 POU3F4P49335 361 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 SLC35A1P78382 337 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 CAMK2DQ13557 499 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 OLFML2AQ68BL7 652 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 CDH24Q86UP0 819 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 OR1J4Q8NGS1 313 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 OR13C3Q8NGS6 347 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 ITFG2Q969R8 447 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 SLAMF6Q96DU3 332 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 ACTR6Q9GZN1 396 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 SLC17A5Q9NRA2 495 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 FAM206AQ9NX38 181 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 PAQR5Q9NXK6 330 aaPredicted RBP17.52■□□□□ 0.39
CLIP3-206ENST00000593074 TAS2R4Q9NYW5 299 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 FARSAQ9Y285 508 aaKnown RBP17.52■□□□□ 0.39
CLIP3-206ENST00000593074 EML6Q6ZMW3 1958 aa17.52■□□□□ 0.39
CLIP3-206ENST00000593074 LOC100289279A0A1B0GTE1 492 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 RAMP1O60894 148 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 CTAG2O75638 210 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 PMS2P2O95744 297 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 ERP29P30040 261 aaKnown RBP17.51■□□□□ 0.39
CLIP3-206ENST00000593074 CLDN6P56747 220 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 MAB21L1Q13394 359 aa17.51■□□□□ 0.39
CLIP3-206ENST00000593074 SSPNQ14714 243 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms