RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 OR2AJ1Q8NGZ0 328 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 GRIP2Q9C0E4 1043 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 TOR3AQ9H497 397 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 HEATR1Q9H583 2144 aaKnown RBP12.93□□□□□ -0.34
DDX39A-221ENST00000593026 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 ST6GALNAC2Q9UJ37 374 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 SPEF1Q9Y4P9 236 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 RAI1Q7Z5J4 1906 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-221ENST00000593026 ITPR2Q14571 2701 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 NOTCH2Q04721 2471 aa12.93□□□□□ -0.34
DDX39A-221ENST00000593026 RER1O15258 196 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 TLX2O43763 284 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-221ENST00000593026 SNAP29O95721 258 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 RAF1P04049 648 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 COX5BP10606 129 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 GSTT1P30711 240 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 GGT2P36268 569 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 HTR5AP47898 357 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 ENTPD1P49961 510 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 GDI2P50395 445 aaKnown RBP12.92□□□□□ -0.34
DDX39A-221ENST00000593026 CDC42P60953 191 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 HGFACQ04756 655 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 KEAP1Q14145 624 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 RAB35Q15286 201 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 KRT80Q6KB66 452 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 SLC18B1Q6NT16 456 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 CORO6Q6QEF8 472 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-221ENST00000593026 CDH24Q86UP0 819 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 GALNT4Q8N4A0 578 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 NUP37Q8NFH4 326 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 FAM81AQ8TBF8 368 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 TMEM163Q8TC26 289 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 SMAP2Q8WU79 429 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-221ENST00000593026 HRASLS5Q96KN8 279 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 IL4I1Q96RQ9 567 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 INTS14Q96SY0 518 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 MBOAT4Q96T53 435 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 DHRS9Q9BPW9 319 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 WDR76Q9H967 626 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 C8orf4Q9NR00 106 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 IMPAD1Q9NX62 359 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 CYB5R1Q9UHQ9 305 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 NDRG4Q9ULP0 352 aaKnown RBP12.92□□□□□ -0.34
DDX39A-221ENST00000593026 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
DDX39A-221ENST00000593026 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 C5orf49A4QMS7 147 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 CASQ2O14958 399 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 TMCC2O75069 709 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 SPARCP09486 303 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 CCNOP22674 350 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 SLC2A5P22732 501 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 NR4A1P22736 598 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 RPS27P42677 84 aaKnown RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 FABP6P51161 128 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 HIST1H3AP68431 136 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 EFNB1P98172 346 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 SNTB2Q13425 540 aaKnown RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 APOFQ13790 326 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 CCDC92Q53HC0 331 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 HIST2H3PS2Q5TEC6 136 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 LCN1P1Q5VSP4 162 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF544Q6NX49 715 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 VHLLQ6RSH7 139 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 HIST2H3AQ71DI3 136 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 ERI1Q8IV48 349 aaKnown RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 PAQR4Q8N4S7 273 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 PACRGLQ8N7B6 248 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 OR8J1Q8NGP2 316 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 ZMYND19Q96E35 227 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 RDH12Q96NR8 316 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 CCL19Q99731 98 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 HDHD2Q9H0R4 259 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 MARCH7Q9H992 704 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 RNPEPL1Q9HAU8 725 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 CA10Q9NS85 328 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 SMPD3Q9NY59 655 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 H2AFY2Q9P0M6 372 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 NKX1-2Q9UD57 310 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 ATPIF1Q9UII2 106 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 GDF2Q9UK05 429 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-221ENST00000593026 TACC2O95359 2948 aa12.91□□□□□ -0.34
DDX39A-221ENST00000593026 OR6C6A6NF89 314 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 ZNF593O00488 134 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-221ENST00000593026 SYNGR3O43761 229 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 ATE1O95260 518 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 DANCRP0C864 163 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 DNASE1P24855 282 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-221ENST00000593026 SLC34A1Q06495 639 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 TEX30Q5JUR7 227 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 OGFRL1Q5TC84 451 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-221ENST00000593026 AADACL4Q5VUY2 407 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 NXNL2Q5VZ03 156 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 TMEM154Q6P9G4 183 aa12.9□□□□□ -0.34
DDX39A-221ENST00000593026 CFAP77Q6ZQR2 320 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms