RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 PRDM13Q9H4Q3 707 aa16.42■□□□□ 0.22
PRKCSH-216ENST00000592445 NOX4Q9NPH5 578 aa16.42■□□□□ 0.22
PRKCSH-216ENST00000592445 MEPEQ9NQ76 525 aaPredicted RBP16.42■□□□□ 0.22
PRKCSH-216ENST00000592445 MIOXQ9UGB7 285 aa16.42■□□□□ 0.22
PRKCSH-216ENST00000592445 GMEB1Q9Y692 573 aa16.42■□□□□ 0.22
PRKCSH-216ENST00000592445 M0QX08 132 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 SELEP16581 610 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 CD247P20963 164 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 MMP16P51512 607 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 WDR4P57081 412 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 GPR157Q5UAW9 335 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 SLC27A4Q6P1M0 643 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 BLOC1S3Q6QNY0 202 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 Q6YL49 198 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 TSPYL5Q86VY4 417 aaPredicted RBP16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 C11orf65Q8NCR3 313 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 OR4D11Q8NGI4 311 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 NMD3Q96D46 503 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 CMBLQ96DG6 245 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 POFUT1Q9H488 388 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 GCM1Q9NP62 436 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 CCDC167Q9P0B6 97 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 NDRG4Q9ULP0 352 aaKnown RBP16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 RNF114Q9Y508 228 aa16.41■□□□□ 0.22
PRKCSH-216ENST00000592445 TRBV5-3A0A0A0MS03 114 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 KIR2DS1A0A191URI9 304 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 OR7A10O76100 309 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 MT-ND1P03886 318 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 KITLGP21583 273 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 TUBG1P23258 451 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 PCBP3P57721 371 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 KRTAP10-3P60369 221 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 HLXQ14774 488 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 TAF9Q16594 264 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 CYP51A1Q16850 503 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 TTMPQ5BVD1 217 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 SLC25A47Q6Q0C1 308 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 FUNDC1Q8IVP5 155 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 ATG16L2Q8NAA4 619 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 MOSPD2Q8NHP6 518 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 PFN4Q8NHR9 129 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 SGTBQ96EQ0 304 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 NEIL1Q96FI4 390 aaPredicted RBP16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 MAGEB18Q96M61 343 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 RBP7Q96R05 134 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 NUDT16L1Q9BRJ7 211 aaKnown RBP16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 TMEM165Q9HC07 324 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 TUBG2Q9NRH3 451 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 TBCCD1Q9NVR7 557 aa16.4■□□□□ 0.22
PRKCSH-216ENST00000592445 A0A1W2PPL8 197 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 SLC22A31A6NKX4 558 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 IFNL4K9M1U5 179 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 CYB5R3P00387 301 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 THRBP10828 461 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 BPIFB3P59826 476 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 FGF12P61328 243 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 TOP3AQ13472 1001 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 RUNDC3AQ59EK9 446 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 ZNF620Q6ZNG0 422 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 NLRC3Q7RTR2 1065 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 PTOV1Q86YD1 416 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 TMEM86BQ8N661 226 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 OR8B3Q8NGG8 313 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 ZNF420Q8TAQ5 688 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 SLC26A7Q8TE54 656 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 FAM71F1Q96KD3 344 aaPredicted RBP16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 OR8B2Q96RD0 313 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 PRSS27Q9BQR3 290 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 ALG12Q9BV10 488 aa16.39■□□□□ 0.21
PRKCSH-216ENST00000592445 C12orf71A8MTZ7 269 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 ERLIN1O75477 346 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 ALX3O95076 343 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 PITPNBP48739 271 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 LAPTM4AQ15012 233 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 FBLN7Q53RD9 439 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 TNFAIP8L3Q5GJ75 292 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 MREGQ8N565 214 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 DACT3Q96B18 629 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 CPPED1Q9BRF8 314 aaPredicted RBP16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 TMEM246Q9BRR3 403 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 PCDHAC1Q9H158 963 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 TXNIPQ9H3M7 391 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 TCF7L1Q9HCS4 588 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 KIF17Q9P2E2 1029 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 ASH2LQ9UBL3 628 aa16.38■□□□□ 0.21
PRKCSH-216ENST00000592445 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 TSPAN15O95858 294 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 MELTFP08582 738 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 MRPL19P49406 292 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 GUCY1A3Q02108 690 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 RUSC1-AS1Q66K80 236 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 EPGNQ6UW88 154 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 SLC30A8Q8IWU4 369 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 OR5AS1Q8N127 324 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 FITM2Q8N6M3 262 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 CLDN22Q8N7P3 220 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 FAM110DQ8TAY7 271 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 FNDC8Q8TC99 324 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 TMEM255BQ8WV15 326 aa16.37■□□□□ 0.21
PRKCSH-216ENST00000592445 HAVCR1Q96D42 359 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms