RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ENTPD1P49961 510 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 NAAAQ02083 359 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 SLC18B1Q6NT16 456 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 ZNF704Q6ZNC4 412 aaPredicted RBP16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 ERI1Q8IV48 349 aaKnown RBP16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 DHRSXQ8N5I4 330 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 INTS14Q96SY0 518 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 ADI1Q9BV57 179 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 CDADC1Q9BWV3 514 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 MARCH7Q9H992 704 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 DNAJC27Q9NZQ0 273 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 AASSQ9UDR5 926 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 CYB5R1Q9UHQ9 305 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 RTTNQ86VV8 2226 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 PLCE1Q9P212 2302 aa16.46■□□□□ 0.23
CLPTM1-209ENST00000588855 IQCMA0A1B0GVH7 501 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 ATP6V1G2-DDX39BF2Z307 99 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 RER1O15258 196 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SGCEO43556 437 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 DOK2O60496 412 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SELENOFO60613 162 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SPARCP09486 303 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 APEX1P27695 318 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 AQP4P55087 323 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 PLP2Q04941 152 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 CFAP77Q6ZQR2 320 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 MEPCEQ7L2J0 689 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 TIGD4Q8IY51 512 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 ENTHD1Q8IYW4 607 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 OR6N2Q8NGY6 317 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 TRUB1Q8WWH5 349 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 NEUROG1Q92886 237 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 ZNF582Q96NG8 517 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 TEAD3Q99594 435 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 H2AFY2Q9P0M6 372 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 KCNG2Q9UJ96 466 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 GDF2Q9UK05 429 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SETXQ7Z333 2677 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 ITPR2Q14571 2701 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 RAI1Q7Z5J4 1906 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 IGHV2OR16-5A0A0B4J2B6 119 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SHISA9B4DS77 424 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 ZNF593O00488 134 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 CRYAAP02489 173 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 CCL2P13500 99 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 NAA10P41227 235 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 CDH11P55287 796 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 HIST1H3AP68431 136 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 ADARB1P78563 741 aaKnown RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 PCK2Q16822 640 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 CCDC92Q53HC0 331 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 HIST2H3PS2Q5TEC6 136 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 LCN1P1Q5VSP4 162 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 TTC23Q5W5X9 447 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SLC22A25Q6T423 547 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 HIST2H3AQ71DI3 136 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 VASH1Q7L8A9 365 aaPredicted RBP16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 GID4Q8IVV7 300 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 DEPDC4Q8N2C3 294 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SLC30A7Q8NEW0 376 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 GJC3Q8NFK1 279 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 OR2AJ1Q8NGZ0 328 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 KCNS3Q9BQ31 491 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 PLEK2Q9NYT0 353 aa16.45■□□□□ 0.22
CLPTM1-209ENST00000588855 SLC22A31A6NKX4 558 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 GABRB1P18505 474 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 KRTAP10-9P60411 292 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 SNRPGP62308 76 aaKnown RBP16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 TEX30Q5JUR7 227 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 TMEM154Q6P9G4 183 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 CDC20BQ86Y33 519 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 ALDH16A1Q8IZ83 802 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 PAQR4Q8N4S7 273 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 LILRB1Q8NHL6 650 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 MAP6Q96JE9 813 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 RADILQ96JH8 1075 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 VCX3BQ9H321 246 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 C1orf198Q9H425 327 aa16.44■□□□□ 0.22
CLPTM1-209ENST00000588855 LOC100509620A0A075B734 347 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 SYNGR3O43761 229 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 ENTPD6O75354 484 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 PTHP01270 115 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 MRPL3P09001 348 aaKnown RBP16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 STOMP27105 288 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 APLNRP35414 380 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 CAPGP40121 348 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 HTR5AP47898 357 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 GGTLC2Q14390 218 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 RAB35Q15286 201 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 ZNF691Q5VV52 312 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 DPY19L4Q7Z388 723 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 DCXRQ7Z4W1 244 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 IL17RDQ8NFM7 739 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 SMAP2Q8WU79 429 aaPredicted RBP16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 APOL4Q9BPW4 351 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 CACNA1DQ01668 2161 aa16.43■□□□□ 0.22
CLPTM1-209ENST00000588855 H0YAE9 185 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 H0YJX3 145 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 ZNF35P13682 527 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 HTR1FP30939 366 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms