RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-206	ENST00000588300	TNFRSF1A	P19438	455 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	TUBG1	P23258	451 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	LCN6	P62502	163 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	SCRN3	Q0VDG4	424 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	PSG7	Q13046	419 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	CDK5R2	Q13319	367 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	FHL1	Q13642	323 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	SPRN	Q5BIV9	151 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	RNF113B	Q8IZP6	322 aa	Known RBP	13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	SPIC	Q8N5J4	248 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	OR13C2	Q8NGS9	318 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	DCLRE1C	Q96SD1	692 aa	Known RBP	13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	NTN4	Q9HB63	628 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	EMC7	Q9NPA0	242 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	TUBG2	Q9NRH3	451 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	TBCCD1	Q9NVR7	557 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	GRHPR	Q9UBQ7	328 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300	AP3M1	Q9Y2T2	418 aa		13.46	□□□□□ -0.25
ERCC1-206	ENST00000588300		J3KTA2	159 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	XKRY	O14609	159 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	SCG5	P05408	212 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	SBK2	P0C263	348 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	FUT4	P22083	530 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	RPL4	P36578	427 aa	Known RBP	13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	HTR5A	P47898	357 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZNF730	Q6ZMV8	503 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	ARPIN	Q7Z6K5	226 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	VTCN1	Q7Z7D3	282 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	KLHL36	Q8N4N3	616 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZDHHC22	Q8N966	263 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	FAM156A	Q8NDB6	213 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	SGMS2	Q8NHU3	365 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	C22orf15	Q8WYQ4	148 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	SAMD8	Q96LT4	415 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	NDEL1	Q9GZM8	345 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	ESM1	Q9NQ30	184 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	TMEM106B	Q9NUM4	274 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	FGFR1OP2	Q9NVK5	253 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	DCAF16	Q9NXF7	216 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	PURG	Q9UJV8	347 aa	Known RBP	13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	SNX13	Q9Y5W8	968 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300	CAPN7	Q9Y6W3	813 aa		13.45	□□□□□ -0.26
ERCC1-206	ENST00000588300		A0A087WUU8	490 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	FFAR1	O14842	300 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	SGCE	O43556	437 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	AHCYL1	O43865	530 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZNF682	O95780	498 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	CD14	P08571	375 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	KITLG	P21583	273 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZFP36	P26651	326 aa	Known RBP	13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	GPR4	P46093	362 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	UBA52	P62987	128 aa	Known RBP	13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	TMEM155	Q4W5P6	130 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	IFI44L	Q53G44	452 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	MBOAT2	Q6ZWT7	520 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZNF283	Q8N7M2	679 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	OR2Z1	Q8NG97	314 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	POP5	Q969H6	163 aa	Known RBP	13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	RCN3	Q96D15	328 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	COG8	Q96MW5	612 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZNF570	Q96NI8	536 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	POFUT1	Q9H488	388 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	PATZ1	Q9HBE1	687 aa	Known RBP	13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	DDX28	Q9NUL7	540 aa	Known RBP	13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	CMTM6	Q9NX76	183 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	PLEK2	Q9NYT0	353 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	ADAM18	Q9Y3Q7	739 aa		13.44	□□□□□ -0.26
ERCC1-206	ENST00000588300	TEX13C	A0A0J9YWL9	993 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	SURF4	O15260	269 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	EGR1	P18146	543 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	BTG1	P62324	171 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	HNRNPA0	Q13151	305 aa	Known RBP	13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	AQP6	Q13520	282 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	ZBED5	Q49AG3	693 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	AWAT1	Q58HT5	328 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	MEST	Q5EB52	335 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	ARMCX4	Q5H9R4	360 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	CGB2	Q6NT52	195 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	RBMS3	Q6XE24	437 aa	Known RBP	13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	TMPRSS11F	Q6ZWK6	438 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	VASH1	Q7L8A9	365 aa	Predicted RBP	13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	RRM2B	Q7LG56	351 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	DEFB108B	Q8NET1	73 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	DVL3	Q92997	716 aa	Predicted RBP	13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	CMBL	Q96DG6	245 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300		Q96M85	177 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	IL19	Q9UHD0	177 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	EGFL7	Q9UHF1	273 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	TMEM5	Q9Y2B1	443 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	PPIAL4A	Q9Y536	164 aa		13.43	□□□□□ -0.26
ERCC1-206	ENST00000588300	PRSS37	A4D1T9	235 aa		13.42	□□□□□ -0.26
ERCC1-206	ENST00000588300	CXCR6	O00574	342 aa		13.42	□□□□□ -0.26
ERCC1-206	ENST00000588300	CDC42EP2	O14613	210 aa		13.42	□□□□□ -0.26
ERCC1-206	ENST00000588300	GSTA4	O15217	222 aa		13.42	□□□□□ -0.26
ERCC1-206	ENST00000588300	SLC22A2	O15244	555 aa		13.42	□□□□□ -0.26
ERCC1-206	ENST00000588300	CTLA4	P16410	223 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms