RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CDC20BQ86Y33 519 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 OR8H3Q8N146 312 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF511Q8NB15 262 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 OR2T35Q8NGX2 323 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 TCF7L1Q9HCS4 588 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 EXOSC3Q9NQT5 275 aaKnown RBP13.1□□□□□ -0.31
CCDC43-203ENST00000588210 PRODH2Q9UF12 536 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 FAM171A2A8MVW0 826 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ACOT7O00154 380 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SERPINI2O75830 405 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MPC2O95563 127 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 LCN1P31025 176 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MAGEB1P43366 347 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 BLVRAP53004 296 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 CLDN12P56749 244 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MLF1P58340 268 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 KLRB1Q12918 225 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SKP2Q13309 424 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 CLLU1Q5K131 121 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 LIPNQ5VXI9 398 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 LRRN1Q6UXK5 716 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 Q6ZTK2 550 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SERPINA12Q8IW75 414 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SPICQ8N5J4 248 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 OR5AK2Q8NH90 309 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 NUBPLQ8TB37 319 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MOGAT1Q96PD6 335 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 OR10A4Q9H209 315 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 METTL17Q9H7H0 456 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 GLTPQ9NZD2 209 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MYOTQ9UBF9 498 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 RALYQ9UKM9 306 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 FKBP7Q9Y680 259 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 CPAMD8Q8IZJ3 1885 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 PIEZO2Q9H5I5 2752 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 BLOC1S5-TXNDC5H3BN57 136 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ARPC1BO15143 372 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 WDPCPO95876 746 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ASAH2BP0C7U1 165 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 UBL4AP11441 157 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 CPN1P15169 458 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ADRA2CP18825 462 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MECP2P51608 486 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ART1P52961 327 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SCAND1P57086 179 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 TAS2R20P59543 309 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 CTXN1P60606 82 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ARG2P78540 354 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 DHODHQ02127 395 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 CD226Q15762 336 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 GLDNQ6ZMI3 551 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 DNM1P46Q6ZS02 220 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SLC29A4Q7RTT9 530 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 C9orf40Q8IXQ3 194 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 DND1Q8IYX4 353 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 BEST3Q8N1M1 668 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 RBMXL3Q8N7X1 1067 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 THAP3Q8WTV1 239 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 MNTQ99583 582 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 DPCDQ9BVM2 203 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-203ENST00000588210 TAS2R10Q9NYW0 307 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 FRRS1LQ9P0K9 344 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 KLK11Q9UBX7 282 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 UBQLN2Q9UHD9 624 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 BOD1L1Q8NFC6 3051 aa13.09□□□□□ -0.31
CCDC43-203ENST00000588210 FAM208BQ5VWN6 2430 aa13.08□□□□□ -0.31
CCDC43-203ENST00000588210 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.31
CCDC43-203ENST00000588210 TMEM200CA6NKL6 621 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 HSPB2A8KAH6 182 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 OIP5O43482 229 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF432O94892 652 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 RPP14O95059 124 aaKnown RBP13.08□□□□□ -0.32
CCDC43-203ENST00000588210 CDK2P24941 298 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 PUDPQ08623 228 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 HSPB2Q16082 182 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 NUP54Q7Z3B4 507 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 C10orf53Q8N6V4 93 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 TSSK2Q96PF2 358 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 UBQLN4Q9NRR5 601 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
CCDC43-203ENST00000588210 TAS2R5Q9NYW4 299 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 TRBV5-7A0A0A0MS05 114 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 OR5H15A6NDH6 313 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF254O75437 659 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 IL5P05113 134 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 SSTR2P30874 369 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 EGR4Q05215 589 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 Q6ZS92 163 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 FTMTQ8N4E7 242 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 GATSQ8NAP1 163 aa13.08□□□□□ -0.32
CCDC43-203ENST00000588210 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms