RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	OR4F15	Q8NGB8	312 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	OR10G9	Q8NGN4	311 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	NUBPL	Q8TB37	319 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	TMEM101	Q96IK0	257 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	SERPINB12	Q96P63	405 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	P2RX4	Q99571	388 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	RASL11B	Q9BPW5	248 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	FBXO44	Q9H4M3	255 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	MYOZ2	Q9NPC6	264 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	STOX2	Q9P2F5	926 aa	Predicted RBP	3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	SHPK	Q9UHJ6	478 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	UBN2	Q6ZU65	1347 aa		3.88	□□□□□ -1.79
TUBD1-208	ENST00000588009	MIA2	Q96PC5	1412 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	MARF1	Q9Y4F3	1742 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	SLIT2	O94813	1529 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	UGGT2	Q9NYU1	1516 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009		A0A1W2PRD5	423 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	SERPINE3	A8MV23	424 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	ZBTB5	O15062	677 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	SIVA1	O15304	175 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	SPOP	O43791	374 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	SRSF10	O75494	262 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	UTS2	O95399	124 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	AIFM1	O95831	613 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	C6orf47	O95873	294 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	TDGF1	P13385	188 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	CD82	P27701	267 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	HTR1E	P28566	365 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	ETV1	P50549	477 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	TDGF1P3	P51864	188 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	UBE2M	P61081	183 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	NUTF2	P61970	127 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	REG3A	Q06141	175 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	GGTLC2	Q14390	218 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	HERPUD1	Q15011	391 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	KCTD19	Q17RG1	926 aa	Predicted RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	CCDC14	Q49A88	953 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	H3F3C	Q6NXT2	135 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	CMTM8	Q8IZV2	173 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	LINC00612	Q8N6U2	182 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	CA5BP1	Q8WTZ4	195 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	GEMIN6	Q8WXD5	167 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	TOP1MT	Q969P6	601 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	ASB9	Q96DX5	294 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	DNAJC1	Q96KC8	554 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	C9orf72	Q96LT7	481 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	PIGU	Q9H490	435 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	NXF3	Q9H4D5	531 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	EML4	Q9HC35	981 aa	Known RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	KCNJ16	Q9NPI9	418 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	PLSCR3	Q9NRY6	295 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	AGPAT4	Q9NRZ5	378 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	SAR1B	Q9Y6B6	198 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	USP32	Q8NFA0	1604 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	CEMIP	Q8WUJ3	1361 aa		3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	ANKRD11	Q6UB99	2663 aa	Predicted RBP	3.87	□□□□□ -1.79
TUBD1-208	ENST00000588009	MLH3	Q9UHC1	1453 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	BDP1	A6H8Y1	2624 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009		A0A1B0GW55	424 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009		A0A1W2PPV4	95 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	ZNF99	A8MXY4	864 aa	Predicted RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	NPIPB7	O75200	414 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	SRP72	O76094	671 aa	Known RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	SCEL	O95171	688 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	SNAI1	O95863	264 aa	Predicted RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	CSTA	P01040	98 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	MB	P02144	154 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	S100A9	P06702	114 aa	Known RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L2	P0CJ85	424 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L3	P0CJ86	424 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L4	P0CJ87	422 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L5	P0CJ88	424 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L6	P0CJ89	424 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L7	P0CJ90	424 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	CALM1	P0DP23	149 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	CALM2	P0DP24	149 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	CALM3	P0DP25	149 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	KLK2	P20151	261 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	AK4	P27144	223 aa	Predicted RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	GPX4	P36969	197 aa	Predicted RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	NBL1	P41271	181 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	CAV2	P51636	162 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	RPS15A	P62244	130 aa	Known RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	SP4	Q02446	784 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	PSMD5	Q16401	504 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	ZBED5	Q49AG3	693 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	CCNJ	Q5T5M9	372 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	AADACL4	Q5VUY2	407 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	FRMPD2B	Q6IN97	320 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	DUX4L9	Q6RFH8	374 aa	Predicted RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	C6orf89	Q6UWU4	347 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	MBOAT1	Q6ZNC8	495 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	TMEM179	Q6ZVK1	233 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	MRPL21	Q7Z2W9	205 aa	Known RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	TMEM150A	Q86TG1	271 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	C11orf42	Q8N5U0	333 aa		3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	INO80E	Q8NBZ0	244 aa	Predicted RBP	3.86	□□□□□ -1.79
TUBD1-208	ENST00000588009	OR5T3	Q8NGG3	340 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms