RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 SLC24A4Q8NFF2 622 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 RNFT2Q96EX2 444 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 MARS2Q96GW9 593 aaKnown RBP8.71□□□□□ -1.01
LINC01539-201ENST00000587904 IFT27Q9BW83 186 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 CACNG6Q9BXT2 260 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 ARL6Q9H0F7 186 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 SPACA1Q9HBV2 294 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 FSCN3Q9NQT6 498 aa8.71□□□□□ -1.01
LINC01539-201ENST00000587904 A0A1B0GUH1 482 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 TMEM72A0PK05 275 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 M0R296 226 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 CASKO14936 926 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF264O43296 627 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 MT-ND4LP03901 98 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 ZGLP1P0C6A0 271 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF883P0CG24 379 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 ADCYAP1P18509 176 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 RBMS1P29558 406 aaKnown RBP8.71□□□□□ -1.02
LINC01539-201ENST00000587904 SLC6A6P31641 620 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 PPT1P50897 306 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 CCR6P51684 374 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 EFNA3P52797 238 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 PNLIPRP2P54317 469 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 PLCXD2Q0VAA5 305 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 DOC2BQ14184 412 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 AKIRIN2Q53H80 203 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 C22orf42Q6IC83 251 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 H3F3CQ6NXT2 135 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 ASB18Q6ZVZ8 466 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 OR13C3Q8NGS6 347 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 MAFIPQ8WZ33 124 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 PHYHIPLQ96FC7 376 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 GAL3ST4Q96RP7 486 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 JAM3Q9BX67 310 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 SLC26A1Q9H2B4 701 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 BCO1Q9HAY6 547 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 TMEM138Q9NPI0 162 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 CMC2Q9NRP2 79 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 ICAM5Q9UMF0 924 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 GOLT1BQ9Y3E0 138 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 TECTAO75443 2155 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 LAMA1P25391 3075 aa8.71□□□□□ -1.02
LINC01539-201ENST00000587904 A8MXE2 369 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 HSBP1L1C9JCN9 74 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 NTN3O00634 580 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 ITGB1BP1O14713 200 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 EIF4E2O60573 245 aaKnown RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 TSPAN2O60636 221 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 CBR3O75828 277 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 PLGP00747 810 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 CD2P06729 351 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 ADRA2AP08913 450 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 FGF5P12034 268 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF14P17017 642 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 S100A2P29034 98 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 GAS1P54826 345 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 FXYD6P3P58550 94 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 BLOC1S1P78537 153 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 INPP5JQ15735 1006 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 SLC22A10Q63ZE4 541 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 PWWP2BQ6NUJ5 590 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 OVCH1Q7RTY7 1134 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 NUP54Q7Z3B4 507 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 BCDIN3DQ7Z5W3 292 aaKnown RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 OAFQ86UD1 273 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 ANGPTL5Q86XS5 388 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 PRSS35Q8N3Z0 413 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 OR13C2Q8NGS9 318 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 METTL21AQ8WXB1 218 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 HSD17B8Q92506 261 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 C3orf49Q96BT1 292 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 MALSU1Q96EH3 234 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 BSCL2Q96G97 398 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 LMF1Q96S06 567 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 GINS4Q9BRT9 223 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 LAT2Q9GZY6 243 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 SIRT7Q9NRC8 400 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 CYSLTR2Q9NS75 346 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 PARPBPQ9NWS1 579 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 H2AFY2Q9P0M6 372 aaPredicted RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 MGAT4CQ9UBM8 478 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 NXT1Q9UKK6 140 aaKnown RBP8.7□□□□□ -1.02
LINC01539-201ENST00000587904 GPR52Q9Y2T5 361 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 FER1L5A0AVI2 2057 aa8.7□□□□□ -1.02
LINC01539-201ENST00000587904 CXorf65A6NEN9 183 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 VSTM2BA6NLU5 285 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 RIIAD1A6NNX1 92 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 IDSB3KWA1 339 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 ALG1L2C9J202 215 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 PRR23D1E9PI22 279 aaPredicted RBP8.69□□□□□ -1.02
LINC01539-201ENST00000587904 ALOX12BO75342 701 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 REM1O75628 298 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 HOXB5P09067 269 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 PRR23D2P0DMB1 279 aaPredicted RBP8.69□□□□□ -1.02
LINC01539-201ENST00000587904 MGMTP16455 207 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 HOXA5P20719 270 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 MPGP29372 298 aa8.69□□□□□ -1.02
LINC01539-201ENST00000587904 ATP6V1E1P36543 226 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms