RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 C9orf139Q6ZV77 190 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 CCDC80Q76M96 950 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 ZER1Q7Z7L7 766 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 SLC30A8Q8IWU4 369 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 CMBLQ96DG6 245 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 RBP7Q96R05 134 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 ALG12Q9BV10 488 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 MAN2C1Q9NTJ4 1040 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 OR5V1Q9UGF6 321 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 STARD10Q9Y365 291 aa13.69□□□□□ -0.22
NPC1-205ENST00000587163 NOTCH1P46531 2555 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 A0A1W2PPL8 197 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 TMEM178BH3BS89 294 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 ZNF205O95201 554 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 OR5F1O95221 314 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 PLATP00750 562 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 KITLGP21583 273 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 TNFSF4P23510 183 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 MDH2P40926 338 aaKnown RBP13.68□□□□□ -0.22
NPC1-205ENST00000587163 MTNR1AP48039 350 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
NPC1-205ENST00000587163 ALG10Q5BKT4 473 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 SPATC1Q76KD6 591 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 IGFN1Q86VF2 1251 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 LRRC75AQ8NAA5 344 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 UPRTQ96BW1 309 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 OR2V2Q96R30 315 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 GCM1Q9NP62 436 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 EMC7Q9NPA0 242 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 TBCCD1Q9NVR7 557 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 PDP1Q9P0J1 537 aaPredicted RBP13.68□□□□□ -0.22
NPC1-205ENST00000587163 IL19Q9UHD0 177 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 HIF3AQ9Y2N7 669 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 MMP24Q9Y5R2 645 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 CMYA5Q8N3K9 4069 aa13.68□□□□□ -0.22
NPC1-205ENST00000587163 GMNCA6NCL1 334 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 HOXA3O43365 443 aaPredicted RBP13.67□□□□□ -0.22
NPC1-205ENST00000587163 NR2C1P13056 603 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 GSTM3P21266 225 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 FUT4P22083 530 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 OR1E2P47887 323 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 MMP16P51512 607 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 CTXN1P60606 82 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 NFYCQ13952 458 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 INTS11Q5TA45 600 aaKnown RBP13.67□□□□□ -0.22
NPC1-205ENST00000587163 ARL9Q6T311 187 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 POU5F2Q8N7G0 328 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 ZNF420Q8TAQ5 688 aaPredicted RBP13.67□□□□□ -0.22
NPC1-205ENST00000587163 LRRC8CQ8TDW0 803 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 RASSF5Q8WWW0 418 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 DACT3Q96B18 629 aaPredicted RBP13.67□□□□□ -0.22
NPC1-205ENST00000587163 HAVCR1Q96D42 359 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 SSBP3Q9BWW4 388 aaPredicted RBP13.67□□□□□ -0.22
NPC1-205ENST00000587163 TMEM165Q9HC07 324 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 POLE4Q9NR33 117 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 IL20RAQ9UHF4 553 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 LRCH1Q9Y2L9 728 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 MED31Q9Y3C7 131 aa13.67□□□□□ -0.22
NPC1-205ENST00000587163 IGHV2-70DA0A0C4DH43 119 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 A0A0G2JK05 382 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 C12orf71A8MTZ7 269 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 ANGPT2O15123 496 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 PPIAL4GP0DN37 164 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 COX5BP10606 129 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 THRBP10828 461 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 MSR1P21757 451 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 FHL1Q13642 323 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 OCLNQ16625 522 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 DEFB112Q30KQ8 113 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 SYT9Q86SS6 491 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 MUC20Q8N307 709 aaPredicted RBP13.66□□□□□ -0.22
NPC1-205ENST00000587163 KIR3DL3Q8N743 410 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 NPEPL1Q8NDH3 523 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 SLC7A6Q92536 515 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 THOC1Q96FV9 657 aaKnown RBP13.66□□□□□ -0.22
NPC1-205ENST00000587163 RABEP2Q9H5N1 569 aa13.66□□□□□ -0.22
NPC1-205ENST00000587163 NDRG4Q9ULP0 352 aaKnown RBP13.66□□□□□ -0.22
NPC1-205ENST00000587163 TRAV40A0A0B4J280 105 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 FAM181BA6NEQ2 426 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 H7C1C5 153 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 DOK2O60496 412 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 CYB5R3P00387 301 aaPredicted RBP13.65□□□□□ -0.22
NPC1-205ENST00000587163 VIMP08670 466 aaKnown RBP13.65□□□□□ -0.22
NPC1-205ENST00000587163 IFI30P13284 250 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 GUCA1AP43080 201 aaPredicted RBP13.65□□□□□ -0.22
NPC1-205ENST00000587163 HTR5AP47898 357 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 LCN6P62502 163 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 OTPQ5XKR4 325 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 BRD3OSQ6XYD6 125 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 MICU2Q8IYU8 434 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 OR5AS1Q8N127 324 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 ATG16L2Q8NAA4 619 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 OR10S1Q8NGN2 331 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 OR51A7Q8NH64 312 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 FNDC8Q8TC99 324 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 WFDC12Q8WWY7 111 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 RAB40AQ8WXH6 277 aa13.65□□□□□ -0.22
NPC1-205ENST00000587163 BPIFA2Q96DR5 249 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms