RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 DOK2O60496 412 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 SCG5P05408 212 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 SBK2P0C263 348 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 COX5BP10606 129 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 RBMXP38159 391 aaKnown RBP16.33■□□□□ 0.2
TRAF4-216ENST00000586813 LCN6P62502 163 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 MAPRE2Q15555 327 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 ANKDD1AQ495B1 522 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 OAFQ86UD1 273 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 SPICQ8N5J4 248 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 POP5Q969H6 163 aaKnown RBP16.33■□□□□ 0.2
TRAF4-216ENST00000586813 EMC7Q9NPA0 242 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 MMP26Q9NRE1 261 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 TBCCD1Q9NVR7 557 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 RHCGQ9UBD6 479 aa16.33■□□□□ 0.2
TRAF4-216ENST00000586813 EFCAB9A8MZ26 197 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 TNFSF4P23510 183 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 YAP1P46937 504 aaKnown RBP16.32■□□□□ 0.2
TRAF4-216ENST00000586813 HTR5AP47898 357 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 PRKCDQ05655 676 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 SCRN3Q0VDG4 424 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 TRAM2Q15035 370 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 TUSC1Q2TAM9 212 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 TMEM155Q4W5P6 130 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 ARMCX4Q5H9R4 360 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 KLHL36Q8N4N3 616 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF283Q8N7M2 679 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 OR2Z1Q8NG97 314 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 LZICQ8WZA0 190 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 SAMD8Q96LT4 415 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 WACQ9BTA9 647 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 FNDC11Q9BVV2 318 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 SAR1AQ9NR31 198 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 GID8Q9NWU2 228 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 POLR3KQ9Y2Y1 108 aaPredicted RBP16.32■□□□□ 0.2
TRAF4-216ENST00000586813 SNX13Q9Y5W8 968 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 MEGF8Q7Z7M0 2845 aa16.32■□□□□ 0.2
TRAF4-216ENST00000586813 ELOVL7A1L3X0 281 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 J3KTA2 159 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 IFNW1P05000 195 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 TNFRSF1AP19438 455 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 KITLGP21583 273 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 TUBG1P23258 451 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 SLC9A3P48764 834 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 SEC61A1P61619 476 aaKnown RBP16.31■□□□□ 0.2
TRAF4-216ENST00000586813 BTG1P62324 171 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 RBMS3Q6XE24 437 aaKnown RBP16.31■□□□□ 0.2
TRAF4-216ENST00000586813 Q6ZR03 302 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 HDXQ7Z353 690 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 VTCN1Q7Z7D3 282 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 SIGLECL1Q8N7X8 197 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 PCYOX1LQ8NBM8 494 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 PATZ1Q9HBE1 687 aaKnown RBP16.31■□□□□ 0.2
TRAF4-216ENST00000586813 TUBG2Q9NRH3 451 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 GRHPRQ9UBQ7 328 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 EGFL7Q9UHF1 273 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 ADAM18Q9Y3Q7 739 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 MGAM2Q2M2H8 2515 aa16.31■□□□□ 0.2
TRAF4-216ENST00000586813 LOC100653049A0A140TA62 436 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 TRAPPC2LH3BP13 241 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 FFAR1O14842 300 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 SGCEO43556 437 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 KRT34O76011 436 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 TROVE2P10155 538 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF12P17014 697 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 GPR4P46093 362 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 SLC6A9P48067 706 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF154Q13106 437 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 ZMYND11Q15326 602 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 MESTQ5EB52 335 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 DOK3Q7L591 496 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 VASH1Q7L8A9 365 aaPredicted RBP16.3■□□□□ 0.2
TRAF4-216ENST00000586813 FAM156AQ8NDB6 213 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 ACOT11Q8WXI4 607 aaPredicted RBP16.3■□□□□ 0.2
TRAF4-216ENST00000586813 SIGLEC11Q96RL6 698 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 VIPAS39Q9H9C1 493 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 NUP50Q9UKX7 468 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 AUP1Q9Y679 476 aa16.3■□□□□ 0.2
TRAF4-216ENST00000586813 A0A087WUU8 490 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 A8MXK9 166 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 CDC42EP2O14613 210 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 CD14P08571 375 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 HKR1P10072 659 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 RPL4P36578 427 aaKnown RBP16.29■□□□□ 0.2
TRAF4-216ENST00000586813 AQP6Q13520 282 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 KLF17Q5JT82 389 aaPredicted RBP16.29■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF730Q6ZMV8 503 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 MBOAT2Q6ZWT7 520 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 FAM122BQ7Z309 247 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 LRRC28Q86X40 367 aaPredicted RBP16.29■□□□□ 0.2
TRAF4-216ENST00000586813 RNF113BQ8IZP6 322 aaKnown RBP16.29■□□□□ 0.2
TRAF4-216ENST00000586813 ITLN1Q8WWA0 313 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 CMBLQ96DG6 245 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 Q96M85 177 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF570Q96NI8 536 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 PLEK2Q9NYT0 353 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 ZNF69Q9UC07 566 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 IL19Q9UHD0 177 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 PPP1R3CQ9UQK1 317 aa16.29■□□□□ 0.2
TRAF4-216ENST00000586813 STARD10Q9Y365 291 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms