RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TMEM239Q8WW34 195 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 ALG12Q9BV10 488 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 MRI1Q9BV20 369 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-225ENST00000586385 KCNN2Q9H2S1 579 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 PRDM13Q9H4Q3 707 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 HIF3AQ9Y2N7 669 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 STARD10Q9Y365 291 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 TIMM10BQ9Y5J6 103 aa9.95□□□□□ -0.82
BRCA1-225ENST00000586385 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 PPIAL4GP0DN37 164 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 MDH2P40926 338 aaKnown RBP9.94□□□□□ -0.82
BRCA1-225ENST00000586385 RBM34P42696 430 aaKnown RBP9.94□□□□□ -0.82
BRCA1-225ENST00000586385 RPL27P61353 136 aaKnown RBP9.94□□□□□ -0.82
BRCA1-225ENST00000586385 DEFB112Q30KQ8 113 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 ESCO2Q56NI9 601 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 ZMAT1Q5H9K5 638 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 OTPQ5XKR4 325 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 SPATC1Q76KD6 591 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 IGFN1Q86VF2 1251 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 OR10A6Q8NH74 314 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 C10orf82Q8WW14 230 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 SLC7A6Q92536 515 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 CMBLQ96DG6 245 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 OR2V2Q96R30 315 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 ELOVL3Q9HB03 270 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 TMEM165Q9HC07 324 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 TMBIM4Q9HC24 238 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 GCM1Q9NP62 436 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 EMC7Q9NPA0 242 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 POLE4Q9NR33 117 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 TBCCD1Q9NVR7 557 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 OR5V1Q9UGF6 321 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 RIMS3Q9UJD0 308 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 PPP1R3CQ9UQK1 317 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 SH3GLB1Q9Y371 365 aa9.94□□□□□ -0.82
BRCA1-225ENST00000586385 IGHV2-70DA0A0C4DH43 119 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 HOXA3O43365 443 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-225ENST00000586385 OR5F1O95221 314 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 ABHD16AO95870 558 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 MSR1P21757 451 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 PMELP40967 661 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 VMACQ2NL98 169 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 ALG10Q5BKT4 473 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 FAM201AQ5SY85 155 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 UNQ6126/PRO20091Q6UXV3 157 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 BRD3OSQ6XYD6 125 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 CALHM3Q86XJ0 350 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 KLBQ86Z14 1044 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 KIR3DL3Q8N743 410 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 HAVCR1Q96D42 359 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 THOC1Q96FV9 657 aaKnown RBP9.93□□□□□ -0.82
BRCA1-225ENST00000586385 CITED1Q99966 193 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 SSBP3Q9BWW4 388 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-225ENST00000586385 MAN2C1Q9NTJ4 1040 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 STX18Q9P2W9 335 aaKnown RBP9.93□□□□□ -0.82
BRCA1-225ENST00000586385 IL19Q9UHD0 177 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 LRCH1Q9Y2L9 728 aa9.93□□□□□ -0.82
BRCA1-225ENST00000586385 A0A1W2PPL8 197 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 H0YL77 283 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 H7C1C5 153 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 FBP2O00757 339 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 COX5BP10606 129 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 ZNF26P17031 533 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-225ENST00000586385 TNFRSF1AP19438 455 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 OR1E2P47887 323 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 MTNR1AP48039 350 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 ARHGDIAP52565 204 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 TAS2R41P59536 307 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 CTXN1P60606 82 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 PCBD1P61457 104 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 LCN6P62502 163 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 RABL3Q5HYI8 236 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 VASH1Q7L8A9 365 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-225ENST00000586385 ZER1Q7Z7L7 766 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 SYT9Q86SS6 491 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 SLC30A8Q8IWU4 369 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 ALDH16A1Q8IZ83 802 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 NPEPL1Q8NDH3 523 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 ZNF420Q8TAQ5 688 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-225ENST00000586385 RAB40AQ8WXH6 277 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 MEGF10Q96KG7 1140 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 RBP7Q96R05 134 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 TMEM246Q9BRR3 403 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 CDADC1Q9BWV3 514 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 C1RLQ9NZP8 487 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 ARMCX1Q9P291 453 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 IL20RAQ9UHF4 553 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 NDUFAF1Q9Y375 327 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 MED31Q9Y3C7 131 aa9.92□□□□□ -0.82
BRCA1-225ENST00000586385 TRAV27A0A087WT01 109 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 IGHV3-64DA0A0J9YX35 117 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 KIR2DS1A0A191URI9 304 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 GMNCA6NCL1 334 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 SRRM5B3KS81 715 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 C22orf46C9J442 243 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 FXYD1O00168 92 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 MLNRO43193 412 aa9.91□□□□□ -0.82
BRCA1-225ENST00000586385 DOK2O60496 412 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms