RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GPR107Q5VW38 600 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 RPL22L1Q6P5R6 122 aaKnown RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 SLC25A47Q6Q0C1 308 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 VASH1Q7L8A9 365 aaPredicted RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 NUFIP2Q7Z417 695 aaKnown RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 P4HA3Q7Z4N8 544 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 SYT9Q86SS6 491 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 TUSC5Q8IXB3 177 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 GPR137CQ8N3F9 429 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 RELL2Q8NC24 303 aaPredicted RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 OR6N2Q8NGY6 317 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 MCHR2Q969V1 340 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 ZNF775Q96BV0 537 aaPredicted RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 TXNDC15Q96J42 360 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 TM9SF2Q99805 663 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 MROQ9BYG7 248 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 NELFAQ9H3P2 528 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 MOB1AQ9H8S9 216 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 ATPIF1Q9UII2 106 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 STUB1Q9UNE7 303 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 SLC5A6Q9Y289 635 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 NOSIPQ9Y314 301 aaKnown RBP11.14□□□□□ -0.63
VMP1-202ENST00000585847 DOPEY1Q5JWR5 2465 aa11.14□□□□□ -0.63
VMP1-202ENST00000585847 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
VMP1-202ENST00000585847 HCFC1P51610 2035 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 METTL15A6NJ78 407 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 RPL36A-HNRNPH2H7BZ11 118 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 H7C1C5 153 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 HAX1O00165 279 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 DCTN6O00399 190 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 DHHO43323 396 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 PLPP2O43688 288 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ZG16O60844 167 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 TMEM127O75204 238 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 TFP02787 698 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 MRPL3P09001 348 aaKnown RBP11.13□□□□□ -0.63
VMP1-202ENST00000585847 MSR1P21757 451 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 AGTR1P30556 359 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 PYCR1P32322 319 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 NAA10P41227 235 aaPredicted RBP11.13□□□□□ -0.63
VMP1-202ENST00000585847 PCBD1P61457 104 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 LCN6P62502 163 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ZNF85Q03923 595 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 RUNX1T1Q06455 604 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ZNF684Q5T5D7 378 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 FDX2Q6P4F2 183 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 CD200R1LQ6Q8B3 271 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 BTLAQ7Z6A9 289 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 LHFPL3Q86UP9 236 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 PHC2Q8IXK0 858 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ZNF679Q8IYX0 411 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 SYT14Q8NB59 555 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 OR52N5Q8NH56 324 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
VMP1-202ENST00000585847 RND1Q92730 232 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 STARD4Q96DR4 205 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ZNF385AQ96PM9 386 aaKnown RBP11.13□□□□□ -0.63
VMP1-202ENST00000585847 OR5M11Q96RB7 305 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 CDADC1Q9BWV3 514 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 SLCO5A1Q9H2Y9 848 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 MOV10Q9HCE1 1003 aaKnown RBP11.13□□□□□ -0.63
VMP1-202ENST00000585847 CLEC2DQ9UHP7 191 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 SSR3Q9UNL2 185 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 GSTK1Q9Y2Q3 226 aa11.13□□□□□ -0.63
VMP1-202ENST00000585847 ACOD1A6NK06 481 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 H3BMQ9 156 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 AIREO43918 545 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 SELENOFO60613 162 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 FARS2O95363 451 aaKnown RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 IL18BPO95998 194 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 IL2RAP01589 272 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 QDPRP09417 244 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 PAX7P23759 505 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 CTSSP25774 331 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 FGF9P31371 208 aaPredicted RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 UGT2B10P36537 528 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 TGFBR2P37173 567 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 LIPAP38571 399 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 SERPINB10P48595 397 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 CCR9P51686 369 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 SIRPAP78324 504 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 ECH1Q13011 328 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 AQP6Q13520 282 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 TSTQ16762 297 aaKnown RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 ZNF829Q3KNS6 432 aaPredicted RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 USP43Q70EL4 1123 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 FAM214BQ7L5A3 538 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 ZNF627Q7L945 461 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 ZNF511Q8NB15 262 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 OR51L1Q8NGJ5 315 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 OR2AJ1Q8NGZ0 328 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 SPRYD4Q8WW59 207 aaPredicted RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 TMIGD2Q96BF3 282 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 APH1AQ96BI3 265 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 C12orf43Q96C57 262 aaKnown RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 TSSK2Q96PF2 358 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms