RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 EXTL2Q9UBQ6 330 aa1.89□□□□□ -2.11
SKA2-210ENST00000584089 LSM7Q9UK45 103 aaKnown RBP1.89□□□□□ -2.11
SKA2-210ENST00000584089 TRIOBPQ9H2D6 2365 aa1.89□□□□□ -2.11
SKA2-210ENST00000584089 TRAV6A0A075B6T7 132 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 OR6C74A6NCV1 312 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 CPLX1O14810 134 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 CLPXO76031 633 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 NDUFB10O96000 172 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 FOXN2P32314 431 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 GPX4P36969 197 aaPredicted RBP1.88□□□□□ -2.11
SKA2-210ENST00000584089 CEACAM3P40198 252 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 VSX2P58304 361 aaPredicted RBP1.88□□□□□ -2.11
SKA2-210ENST00000584089 ADARB1P78563 741 aaKnown RBP1.88□□□□□ -2.11
SKA2-210ENST00000584089 BST1Q10588 318 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 QPRTQ15274 297 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 ZMYND11Q15326 602 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 SNRNP35Q16560 246 aaKnown RBP1.88□□□□□ -2.11
SKA2-210ENST00000584089 NIPA1Q7RTP0 329 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 SLC16A13Q7RTY0 426 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 FBXL13Q8NEE6 735 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 OR2A1Q8NGT9 310 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 CIRBP-AS1Q8TBR5 109 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 ZNF502Q8TBZ5 544 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 ZNF488Q96MN9 340 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 ATP5SQ99766 215 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 OR52D1Q9H346 318 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 C1orf198Q9H425 327 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 VANGL2Q9ULK5 521 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 SIGLEC9Q9Y336 463 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 SHANK1Q9Y566 2161 aa1.88□□□□□ -2.11
SKA2-210ENST00000584089 K7EM74 188 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 CST1P01037 141 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 CD3GP09693 182 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 ZNF806P0C7X5 589 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 SLC2A3P11169 496 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 IL1RNP18510 177 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 NCF2P19878 526 aaPredicted RBP1.87□□□□□ -2.11
SKA2-210ENST00000584089 RAB3AP20336 220 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 NSG1P42857 185 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 SLC39A6Q13433 755 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 PRAMEF5Q5TYX0 476 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 PRAMEF6Q5VXH4 476 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 DENND4AQ7Z401 1863 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 SNX20Q7Z614 316 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 WDFY1Q8IWB7 410 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 TBC1D21Q8IYX1 336 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 UBE2J2Q8N2K1 259 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 MIR7-3HGQ8N6C7 128 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 NECAB1Q8N987 351 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 SLC7A13Q8TCU3 470 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 PTX4Q96A99 478 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 SLC25A46Q96AG3 418 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 CCDC126Q96EE4 140 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 TBL1YQ9BQ87 522 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 FGF20Q9NP95 211 aaPredicted RBP1.87□□□□□ -2.11
SKA2-210ENST00000584089 TRMT112Q9UI30 125 aaKnown RBP1.87□□□□□ -2.11
SKA2-210ENST00000584089 STARD10Q9Y365 291 aa1.87□□□□□ -2.11
SKA2-210ENST00000584089 CSDC2Q9Y534 153 aaKnown RBP1.87□□□□□ -2.11
SKA2-210ENST00000584089 TSSC4Q9Y5U2 329 aaPredicted RBP1.87□□□□□ -2.11
SKA2-210ENST00000584089 USP47Q96K76 1375 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 AKNAQ7Z591 1439 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 IGLV1-36A0A0B4J1U3 117 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 CENPVL3A0A0U1RRI6 287 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 H0YJW9 148 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 CHST1O43916 411 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 KLHL41O60662 606 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 IGHDP01880 384 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 OR8U9P0C7N5 309 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 ZNF688P0C7X2 276 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 ZNF735P0CB33 412 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 CHMLP26374 656 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 HCAR3P49019 387 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 RND2P52198 227 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 IFT88Q13099 833 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 OR7A5Q15622 319 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 CERS6Q6ZMG9 384 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 Q6ZSR3 168 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 LRRC52Q8N7C0 313 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 OR6N1Q8NGY5 312 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 OR13G1Q8NGZ3 307 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 DNAJC1Q96KC8 554 aaKnown RBP1.86□□□□□ -2.11
SKA2-210ENST00000584089 GCOM2Q9BZD3 368 aaPredicted RBP1.86□□□□□ -2.11
SKA2-210ENST00000584089 ILKAPQ9H0C8 392 aaPredicted RBP1.86□□□□□ -2.11
SKA2-210ENST00000584089 PSMC3IPQ9P2W1 217 aaPredicted RBP1.86□□□□□ -2.11
SKA2-210ENST00000584089 ENOPH1Q9UHY7 261 aa1.86□□□□□ -2.11
SKA2-210ENST00000584089 SHROOM3Q8TF72 1996 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 ZNF716A6NP11 495 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 LRRIQ3A6PVS8 624 aaPredicted RBP1.85□□□□□ -2.11
SKA2-210ENST00000584089 UBXN8O00124 270 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 NUPL2O15504 423 aaKnown RBP1.85□□□□□ -2.11
SKA2-210ENST00000584089 REM1O75628 298 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 SERPINA5P05154 406 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 CTSLP07711 333 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 TNNI1P19237 187 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 DCKP27707 260 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 HNRNPH3P31942 346 aaKnown RBP1.85□□□□□ -2.11
SKA2-210ENST00000584089 KIR3DL2P43630 455 aa1.85□□□□□ -2.11
SKA2-210ENST00000584089 CSNK1EP49674 416 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms