RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 TIPRLO75663 272 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 F12P00748 615 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 HLA-DQA2P01906 255 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ERCC1P07992 297 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ADRA2AP08913 450 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 PCSK6P29122 969 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 HTR5AP47898 357 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ARHGDIAP52565 204 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 SELENOVP59797 346 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ERVS71-1P61550 626 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 LSM6P62312 80 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 GLO1Q04760 184 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 COX10Q12887 443 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 MEP1BQ16820 701 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 LRP11Q86VZ4 500 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 HS3ST5Q8IZT8 346 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ZCCHC24Q8N2G6 241 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 CYB561A3Q8NBI2 242 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 NPEPL1Q8NDH3 523 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 OR1J1Q8NGS3 322 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 OR4Q3Q8NH05 313 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 SMR3AQ99954 134 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 RHNO1Q9BSD3 238 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 RAB1BQ9H0U4 201 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF556Q9HAH1 456 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 PLEK2Q9NYT0 353 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 NDRG4Q9ULP0 352 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 BAIAP2Q9UQB8 552 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 ARFGEF3Q5TH69 2177 aa10.84□□□□□ -0.67
SMARCE1-218ENST00000582955 RNF223E7ERA6 249 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 SYNGR3O43761 229 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 DEAF1O75398 565 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 IFNGP01579 166 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 TP53P04637 393 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 GAAP10253 952 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 PRKACGP22612 351 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 POU1F1P28069 291 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 WNT5AP41221 380 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 ALDH3B1P43353 468 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 EVX1P49640 407 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 DSCR9P59020 149 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 MAD2L1BPQ15013 274 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 CARTPTQ16568 116 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 NKPD1Q17RQ9 610 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 SLC36A3Q495N2 470 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 SPATA46Q5T0L3 261 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 UNQ6126/PRO20091Q6UXV3 157 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 CD300LDQ6UXZ3 194 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 VASH1Q7L8A9 365 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 BIVMQ86UB2 503 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 ZBTB46Q86UZ6 589 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 LNX2Q8N448 690 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 ATG16L2Q8NAA4 619 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 SLC37A3Q8NCC5 494 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 PROKR2Q8NFJ6 384 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 OR2T4Q8NH00 348 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 ABHD4Q8TB40 342 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 SYNPRQ8TBG9 265 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 TPK1Q9H3S4 243 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 KIF17Q9P2E2 1029 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 MYEF2Q9P2K5 600 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 KLHL21Q9UJP4 597 aa10.83□□□□□ -0.68
SMARCE1-218ENST00000582955 IGHV4-30-2A0A087WSY4 118 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 RIIAD1A6NNX1 92 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 RER1O15258 196 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 ABHD16AO95870 558 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CLPTM1O96005 669 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CSF3P09919 207 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 COX5BP10606 129 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 GCH1P30793 250 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 PYCR1P32322 319 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 KLF3P57682 345 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 TEKQ02763 1124 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CCNIQ14094 377 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CRMP1Q14194 572 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CORO6Q6QEF8 472 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 ARL9Q6T311 187 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CLEC9AQ6UXN8 241 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 DNM1P46Q6ZS02 220 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 RFPL4BQ6ZWI9 263 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 LINC00346Q8IVM7 164 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 ZNF101Q8IZC7 436 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 IQCF1Q8N6M8 205 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 GJC3Q8NFK1 279 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 SLC26A10Q8NG04 563 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 OR9Q1Q8NGQ5 310 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 FAM168AQ92567 244 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 C4orf45Q96LM5 186 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 CDADC1Q9BWV3 514 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 REG4Q9BYZ8 158 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 MS4A5Q9H3V2 200 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 ELOVL3Q9HB03 270 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 TAAR3PQ9P1P4 343 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 REV1Q9UBZ9 1251 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 LHFPL6Q9Y693 200 aa10.82□□□□□ -0.68
SMARCE1-218ENST00000582955 EBAG9O00559 213 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms