RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SYT4	Q9H2B2	425 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MYEF2	Q9P2K5	600 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PRPF19	Q9UMS4	504 aa	Known RBP	10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	IER3IP1	Q9Y5U9	82 aa		10.77	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	LOC100289279	A0A1B0GTE1	492 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PLSCR5	A0PG75	271 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SGCE	O43556	437 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SLC16A7	O60669	478 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	DIRAS1	O95057	198 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	CLPTM1	O96005	669 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HPX	P02790	462 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	NAT2	P11245	290 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HNF1A	P20823	631 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PCMT1	P22061	227 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	CCNO	P22674	350 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	RRM2	P31350	389 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MSX2	P35548	267 aa	Predicted RBP	10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	WNT5A	P41221	380 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	CRYBB2	P43320	205 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	RGS6	P49758	472 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	TRIM25	Q14258	630 aa	Known RBP	10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MAD2L1BP	Q15013	274 aa	Predicted RBP	10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	LCN8	Q6JVE9	175 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZNF774	Q6NX45	483 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZNF101	Q8IZC7	436 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	FANK1	Q8TC84	345 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	RASD2	Q96D21	266 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ERMAP	Q96PL5	475 aa	Predicted RBP	10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GPA33	Q99795	319 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	BEX2	Q9BXY8	128 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	RACGAP1	Q9H0H5	632 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR52D1	Q9H346	318 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZDHHC8	Q9ULC8	765 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	FZR1	Q9UM11	496 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708		V9GYQ6	96 aa		10.76	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708		H7C1C5	153 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SOCS2	O14508	198 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	RP2	O75695	350 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	REN	P00797	406 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	TF	P02787	698 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZNF16	P17020	682 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GSTM3	P21266	225 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	CDKN2A	P42771	156 aa	Known RBP	10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GPR6	P46095	362 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZNF81	P51508	661 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ERVS71-1	P61550	626 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PPP1CB	P62140	327 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	LCN6	P62502	163 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GLO1	Q04760	184 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PTCHD4	Q6ZW05	846 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	JAZF1	Q86VZ6	243 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	DHFR2	Q86XF0	187 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	LINC01356	Q8N9X3	169 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ICA1L	Q8NDH6	482 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	GJC3	Q8NFK1	279 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ABHD4	Q8TB40	342 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	KLF14	Q8TD94	323 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ASB9	Q96DX5	294 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	NUAK2	Q9H093	628 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SHARPIN	Q9H0F6	387 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PLEK2	Q9NYT0	353 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	KCNG2	Q9UJ96	466 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	KLHL21	Q9UJP4	597 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	COA3	Q9Y2R0	106 aa	Predicted RBP	10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MALRD1	Q5VYJ5	2156 aa		10.75	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR6C6	A6NF89	314 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	TNFRSF11B	O00300	401 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	DOK2	O60496	412 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PPP1R3D	O95685	299 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ABHD16A	O95870	558 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	TGFA	P01135	160 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SCG5	P05408	212 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	NOS3	P29474	1203 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HTR5A	P47898	357 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	MMP15	P51511	669 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	CDH15	P55291	814 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HIST1H3A	P68431	136 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SLC3A1	Q07837	685 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ECH1	Q13011	328 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SLC36A3	Q495N2	470 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	FAM98B	Q52LJ0	330 aa	Known RBP	10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HIST2H3PS2	Q5TEC6	136 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	PGBD2	Q6P3X8	592 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZNF620	Q6ZNG0	422 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HIST2H3A	Q71DI3	136 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	VASH1	Q7L8A9	365 aa	Predicted RBP	10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ZBTB46	Q86UZ6	589 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR52L1	Q8NGH7	329 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR5L1	Q8NGL2	311 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	SLC25A40	Q8TBP6	338 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ELMOD3	Q96FG2	381 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	IFT27	Q9BW83	186 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR2J1	Q9GZK6	312 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	EGLN1	Q9GZT9	426 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	HDHD2	Q9H0R4	259 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	OR51B6	Q9H340	312 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	EMC7	Q9NPA0	242 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	DECR2	Q9NUI1	292 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	IL20	Q9NYY1	176 aa		10.74	□□□□□ -0.69
CDK5RAP3-222	ENST00000581708	ASH2L	Q9UBL3	628 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms