RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 IGHV2OR16-5A0A0B4J2B6 119 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 UNC119BA6NIH7 251 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 EFCAB9A8MZ26 197 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 H0YAE9 185 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 J3QLI3 93 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ZNF208O43345 1280 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 PLPP2O43688 288 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 IGLV1-44P01699 117 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 OSMP13725 252 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ACADSP16219 412 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 MAKP20794 623 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 FKBP2P26885 142 aaKnown RBP9.19□□□□□ -0.94
TOP3A-210ENST00000580713 CAPGP40121 348 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 SLC9A3P48764 834 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 CLK1P49759 484 aaKnown RBP9.19□□□□□ -0.94
TOP3A-210ENST00000580713 MAP2K6P52564 334 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 CRISP1P54107 249 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ESRRGP62508 458 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ADARB1P78563 741 aaKnown RBP9.19□□□□□ -0.94
TOP3A-210ENST00000580713 TAF11Q15544 211 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 SLC36A3Q495N2 470 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 C1orf140Q5VVS0 124 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 TTC23Q5W5X9 447 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 RASSF6Q6ZTQ3 369 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 C10orf53Q8N6V4 93 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 TFAP2CQ92754 450 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 YIPF5Q969M3 257 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 TMEM45BQ96B21 275 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 DDIT4LQ96D03 193 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 BOD1Q96IK1 185 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ZNF385AQ96PM9 386 aaKnown RBP9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ZNF416Q9BWM5 594 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 SLITRK2Q9H156 845 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 MS4A5Q9H3V2 200 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 MOV10Q9HCE1 1003 aaKnown RBP9.19□□□□□ -0.94
TOP3A-210ENST00000580713 FAM118AQ9NWS6 357 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 TRAPPC4Q9Y296 219 aa9.19□□□□□ -0.94
TOP3A-210ENST00000580713 LOC100130705A0A1B0GUX0 176 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 ZC3H12DA2A288 527 aaKnown RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 DNAJC9-AS1A6NH13 148 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 H3BN98 237 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 CDC42EP2O14613 210 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 SLC16A6O15403 523 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 NPIPB7O75200 414 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 OR7A10O76100 309 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 SOX14O95416 240 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 AHSA1O95433 338 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 CH25HO95992 272 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 CBR1P16152 277 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 FUT1P19526 365 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 POU1F1P28069 291 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 ALDH3B1P43353 468 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 RPS5P46782 204 aaKnown RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 H3F3AP84243 136 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 MVKQ03426 396 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 BAMBIQ13145 260 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 ZNF74Q16587 644 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 AVPI1Q5T686 147 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 GPAT4Q86UL3 456 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 MYPOPQ86VE0 399 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 OR9K2Q8NGE7 335 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 FANK1Q8TC84 345 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 TAAR8Q969N4 342 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 RAB39BQ96DA2 213 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 KTI12Q96EK9 354 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 ALKBH3Q96Q83 286 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 SYT3Q9BQG1 590 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 MRPL37Q9BZE1 423 aaKnown RBP9.18□□□□□ -0.94
TOP3A-210ENST00000580713 CRLF2Q9HC73 371 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 NANSQ9NR45 359 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 CDH10Q9Y6N8 788 aa9.18□□□□□ -0.94
TOP3A-210ENST00000580713 CMYA5Q8N3K9 4069 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 LRRN3E7EW58 273 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 DENRO43583 198 aaKnown RBP9.17□□□□□ -0.94
TOP3A-210ENST00000580713 OR2T1O43869 369 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 AKR7A3O95154 331 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 MT-ATP6P00846 226 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 IGKV3-15P01624 115 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 BGLAPP02818 100 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 IMPDH2P12268 514 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 EPHA2P29317 976 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 POLR2IP36954 125 aaKnown RBP9.17□□□□□ -0.94
TOP3A-210ENST00000580713 CAPZA2P47755 286 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 POU3F1Q03052 451 aaPredicted RBP9.17□□□□□ -0.94
TOP3A-210ENST00000580713 MED21Q13503 144 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 MAD2L1BPQ15013 274 aaPredicted RBP9.17□□□□□ -0.94
TOP3A-210ENST00000580713 ZBED5Q49AG3 693 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 FAM69AQ5T7M9 428 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 RPL13AP3Q6NVV1 102 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 PAQR6Q6TCH4 344 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 ZNF620Q6ZNG0 422 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 OAFQ86UD1 273 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 CLDN22Q8N7P3 220 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 TMEM99Q8N816 258 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 FAM169BQ8N8A8 192 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 ZIC4Q8N9L1 334 aa9.17□□□□□ -0.94
TOP3A-210ENST00000580713 OR13C2Q8NGS9 318 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms