RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ZNF32P17041 273 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 DCKP27707 260 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 ZNF91Q05481 1191 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 SRSF1Q07955 248 aaKnown RBP eCLIP12.47□□□□□ -0.41
SKA2-205ENST00000580541 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
SKA2-205ENST00000580541 TAF13Q15543 124 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 MEP1BQ16820 701 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 ARL9Q6T311 187 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 UGT2A3Q6UWM9 527 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 UNQ6126/PRO20091Q6UXV3 157 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.47□□□□□ -0.41
SKA2-205ENST00000580541 SLC35F2Q8IXU6 374 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 ZNF540Q8NDQ6 660 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 FAM222BQ8WU58 562 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 THEM6Q8WUY1 208 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 FBXO17Q96EF6 278 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 OR2H1Q9GZK4 316 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 HDHD2Q9H0R4 259 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 ADGRL4Q9HBW9 690 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 AMBNQ9NP70 447 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 PLEK2Q9NYT0 353 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 AASSQ9UDR5 926 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 ATPIF1Q9UII2 106 aa12.47□□□□□ -0.41
SKA2-205ENST00000580541 GDF2Q9UK05 429 aaPredicted RBP12.47□□□□□ -0.41
SKA2-205ENST00000580541 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
SKA2-205ENST00000580541 RELNP78509 3460 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 DAPL1A0PJW8 107 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 SELENOFO60613 162 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 GOSR1O95249 250 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 SCG5P05408 212 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 MMP7P09237 267 aaPredicted RBP12.46□□□□□ -0.41
SKA2-205ENST00000580541 PIPP12273 146 aaPredicted RBP12.46□□□□□ -0.41
SKA2-205ENST00000580541 MYL12AP19105 171 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 PTAFRP25105 342 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 APLNRP35414 380 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.41
SKA2-205ENST00000580541 PSG4Q00888 419 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 RAB35Q15286 201 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 PABPC1L2AQ5JQF8 200 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 ELFN2Q5R3F8 820 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 ALKBH2Q6NS38 261 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 DEGS2Q6QHC5 323 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 B3GLCTQ6Y288 498 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 DCXRQ7Z4W1 244 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 KCTD20Q7Z5Y7 419 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 MDP1Q86V88 176 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 CDC20BQ86Y33 519 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 ZNF786Q8N393 782 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 STX19Q8N4C7 294 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 OR10H4Q8NGA5 316 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 TMEM80Q96HE8 168 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 SPOCK3Q9BQ16 436 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 MROQ9BYG7 248 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 ESRP2Q9H6T0 727 aaKnown RBP12.46□□□□□ -0.41
SKA2-205ENST00000580541 NIPAL2Q9H841 368 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 CRNNQ9UBG3 495 aaPredicted RBP12.46□□□□□ -0.41
SKA2-205ENST00000580541 LRCH1Q9Y2L9 728 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 LHFPL6Q9Y693 200 aa12.46□□□□□ -0.41
SKA2-205ENST00000580541 HEATR1Q9H583 2144 aaKnown RBP12.46□□□□□ -0.42
SKA2-205ENST00000580541 OR6C6A6NF89 314 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 DOK2O60496 412 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 ZNF254O75437 659 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 IGKV3-15P01624 115 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 MRPL3P09001 348 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 TACSTD2P09758 323 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 ALOX5APP20292 161 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 CCKARP32238 428 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 GDI2P50395 445 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 NR1H2P55055 460 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 GRB2P62993 217 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 HIST1H3AP68431 136 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 EGR3Q06889 387 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 SMN1Q16637 294 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 TBC1D28Q2M2D7 210 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 HIST2H3PS2Q5TEC6 136 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 CORO6Q6QEF8 472 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 PLEKHG7Q6ZR37 379 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 HIST2H3AQ71DI3 136 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 LINC00346Q8IVM7 164 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 DMRTC2Q8IXT2 367 aaPredicted RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 OR1F12Q8NHA8 337 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 LINC01560Q8TB33 94 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 SNX33Q8WV41 574 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 HTRA1Q92743 480 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 SPTSSAQ969W0 71 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 LGALS12Q96DT0 336 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 ZC3HAV1LQ96H79 300 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 RADILQ96JH8 1075 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 COQ7Q99807 217 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 ABHD6Q9BV23 337 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 SP140LQ9H930 580 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 FGF20Q9NP95 211 aaPredicted RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 NPDC1Q9NQX5 325 aaPredicted RBP12.45□□□□□ -0.42
SKA2-205ENST00000580541 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
SKA2-205ENST00000580541 ZNF224Q9NZL3 707 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms